RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 COPRSQ9NQ92 184 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 ZNRF3Q9ULT6 936 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 SPATA5Q8NB90 893 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 SAP30BPQ9UHR5 308 aaKnown RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 ZHX1Q9UKY1 873 aaPredicted RBP10.53□□□□□ -0.72
GGA3-202ENST00000538886 DENND2AQ9ULE3 1009 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 PLEKHG2Q9H7P9 1386 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 SULF1Q8IWU6 871 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 DCTPP1Q9H773 170 aa10.53□□□□□ -0.72
GGA3-202ENST00000538886 KDM4AO75164 1064 aa10.52□□□□□ -0.72
GGA3-202ENST00000538886 SPTY2D1Q68D10 685 aaPredicted RBP10.52□□□□□ -0.72
GGA3-202ENST00000538886 SIRT2Q8IXJ6 389 aa10.52□□□□□ -0.72
GGA3-202ENST00000538886 CNOT7Q9UIV1 285 aaKnown RBP10.52□□□□□ -0.72
GGA3-202ENST00000538886 BTAF1O14981 1849 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 PSMD14O00487 310 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 BAG3O95817 575 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 CSF1RP07333 972 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 DCPSQ96C86 337 aaKnown RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 DBNLQ9UJU6 430 aaKnown RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 LDHCP07864 332 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 PRDX5P30044 214 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 GMPSP49915 693 aaPredicted RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 IKQ13123 557 aaPredicted RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 PAG1Q9NWQ8 432 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
GGA3-202ENST00000538886 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
GGA3-202ENST00000538886 DHX16O60231 1041 aaKnown RBP10.51□□□□□ -0.73
GGA3-202ENST00000538886 CDK11BP21127 795 aaKnown RBP10.51□□□□□ -0.73
GGA3-202ENST00000538886 CXCL9Q07325 125 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 WDR66Q8TBY9 1149 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 ANTXR1Q9H6X2 564 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 HAND2P61296 217 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 FAM84BQ96KN1 310 aaPredicted RBP10.51□□□□□ -0.73
GGA3-202ENST00000538886 RIPOR2Q9Y4F9 1068 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 KDM2BQ8NHM5 1336 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 COA1Q9GZY4 146 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 FAM13BQ9NYF5 915 aa10.51□□□□□ -0.73
GGA3-202ENST00000538886 NF2P35240 595 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 PODNQ7Z5L7 613 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 TEKT1Q969V4 418 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 RASGRF1Q13972 1273 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 SLFNL1Q499Z3 407 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 MAP1SQ66K74 1059 aaPredicted RBP10.5□□□□□ -0.73
GGA3-202ENST00000538886 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 ZGPATQ8N5A5 531 aaKnown RBP10.5□□□□□ -0.73
GGA3-202ENST00000538886 RUFY2Q8WXA3 655 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 TDRD3Q9H7E2 651 aaKnown RBP10.5□□□□□ -0.73
GGA3-202ENST00000538886 USP40Q9NVE5 1235 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 MAPKAPK5Q8IW41 473 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 TEX11Q8IYF3 940 aa10.5□□□□□ -0.73
GGA3-202ENST00000538886 EPS15P42566 896 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 PDE1AP54750 535 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 MIGA2Q7L4E1 593 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 ATG9AQ7Z3C6 839 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 NACAP1Q9BZK3 213 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 SLKQ9H2G2 1235 aaPredicted RBP10.49□□□□□ -0.73
GGA3-202ENST00000538886 MKNK2Q9HBH9 465 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
GGA3-202ENST00000538886 HOXA10P31260 410 aaPredicted RBP10.49□□□□□ -0.73
GGA3-202ENST00000538886 TGFBRAP1Q8WUH2 860 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 NAPBQ9H115 298 aa10.49□□□□□ -0.73
GGA3-202ENST00000538886 CASP7P55210 303 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 TRDNQ13061 729 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 TTF1Q15361 905 aaPredicted RBP10.48□□□□□ -0.73
GGA3-202ENST00000538886 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
GGA3-202ENST00000538886 PLA2G12BQ9BX93 195 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 SLC4A4Q9Y6R1 1079 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 ATP10DQ9P241 1426 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 NFKBIEO00221 500 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 KIAA2012Q0VF49 1180 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 MAPK8IP2Q13387 824 aaPredicted RBP10.48□□□□□ -0.73
GGA3-202ENST00000538886 SCARF1Q14162 830 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 CRY2Q49AN0 593 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 CCAR1Q8IX12 1150 aaKnown RBP10.48□□□□□ -0.73
GGA3-202ENST00000538886 TBC1D22AQ8WUA7 517 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 ARMT1Q9H993 441 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 PRDM10Q9NQV6 1147 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 THSD7AQ9UPZ6 1657 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 WDR78Q5VTH9 848 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 CCDC129Q6ZRS4 1044 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 KRT26Q7Z3Y9 468 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
GGA3-202ENST00000538886 CTDP1Q9Y5B0 961 aaPredicted RBP10.48□□□□□ -0.73
GGA3-202ENST00000538886 MAGEB6P1A0A0J9YX57 407 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms