RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TPTE2Q6XPS3 522 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
ACTN1-205ENST00000538545 ZNF831Q5JPB2 1677 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
ACTN1-205ENST00000538545 BRD1O95696 1058 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 APPP05067 770 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 GPR101Q96P66 508 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-205ENST00000538545 DSCC1Q9BVC3 393 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-205ENST00000538545 SMC3Q9UQE7 1217 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 TXNRD3Q86VQ6 643 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 MIGA1Q8NAN2 632 aa16.82■□□□□ 0.28
ACTN1-205ENST00000538545 SYT1P21579 422 aa16.81■□□□□ 0.28
ACTN1-205ENST00000538545 NCLP19338 710 aaKnown RBP16.81■□□□□ 0.28
ACTN1-205ENST00000538545 RPS8P62241 208 aaKnown RBP16.81■□□□□ 0.28
ACTN1-205ENST00000538545 FGD1P98174 961 aa16.81■□□□□ 0.28
ACTN1-205ENST00000538545 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
ACTN1-205ENST00000538545 NSFL1CQ9UNZ2 370 aaKnown RBP16.81■□□□□ 0.28
ACTN1-205ENST00000538545 PRKAB2O43741 272 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 JAK2O60674 1132 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 HSP90B1P14625 803 aaKnown RBP16.8■□□□□ 0.28
ACTN1-205ENST00000538545 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
ACTN1-205ENST00000538545 TM4SF1P30408 202 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 FOSBP53539 338 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 ARMT1Q9H993 441 aa16.8■□□□□ 0.28
ACTN1-205ENST00000538545 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
ACTN1-205ENST00000538545 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 SMIM22K7EJ46 135 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 UQCRFS1P1P0C7P4 283 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 GYS1P13807 737 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 ADGRA1Q86SQ6 560 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.285e-6■■■■■ 34.6
ACTN1-205ENST00000538545 CCT2P78371 535 aaKnown RBP16.79■□□□□ 0.28
ACTN1-205ENST00000538545 TXNRD1Q16881 649 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 NYXQ9GZU5 481 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 RTL9Q8NET4 1388 aa16.79■□□□□ 0.28
ACTN1-205ENST00000538545 ZFYP08048 801 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 NCOA5Q9HCD5 579 aaKnown RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 COL1A1P02452 1464 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 MBD4O95243 580 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 FERMT3Q86UX7 667 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 CNBD1Q8NA66 436 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 NBPF3Q9H094 633 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 FAM84BQ96KN1 310 aaPredicted RBP16.78■□□□□ 0.28
ACTN1-205ENST00000538545 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
ACTN1-205ENST00000538545 KRT32Q14532 448 aa16.77■□□□□ 0.28
ACTN1-205ENST00000538545 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-205ENST00000538545 AIDAQ96BJ3 306 aa16.77■□□□□ 0.28
ACTN1-205ENST00000538545 RBM27Q9P2N5 1060 aaKnown RBP16.77■□□□□ 0.28
ACTN1-205ENST00000538545 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-205ENST00000538545 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.28
ACTN1-205ENST00000538545 STX6O43752 255 aa16.77■□□□□ 0.27
ACTN1-205ENST00000538545 ZNF827Q17R98 1081 aa16.77■□□□□ 0.27
ACTN1-205ENST00000538545 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
ACTN1-205ENST00000538545 DHX32Q7L7V1 743 aaKnown RBP16.76■□□□□ 0.27
ACTN1-205ENST00000538545 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
ACTN1-205ENST00000538545 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
ACTN1-205ENST00000538545 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-205ENST00000538545 TBC1D10CQ8IV04 446 aa16.76■□□□□ 0.27
ACTN1-205ENST00000538545 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-205ENST00000538545 EPB41L4AQ9HCS5 686 aaPredicted RBP16.76■□□□□ 0.27
ACTN1-205ENST00000538545 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
ACTN1-205ENST00000538545 APBA3O96018 575 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 SCRN1Q12765 414 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
ACTN1-205ENST00000538545 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
ACTN1-205ENST00000538545 RAI14Q9P0K7 980 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 DDR1Q08345 913 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 MAP3K12Q12852 859 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 IMMTQ16891 758 aaKnown RBP16.75■□□□□ 0.27
ACTN1-205ENST00000538545 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
ACTN1-205ENST00000538545 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
ACTN1-205ENST00000538545 A0A1B0GUL6 1792 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 ZNF213O14771 459 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 SERPINB2P05120 415 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 EXOSC10Q01780 885 aaKnown RBP16.74■□□□□ 0.27
ACTN1-205ENST00000538545 CTDSPL2Q05D32 466 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 SDR42E1Q8WUS8 393 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
ACTN1-205ENST00000538545 GADD45BO75293 160 aaPredicted RBP16.74■□□□□ 0.27
ACTN1-205ENST00000538545 CAVIN1Q6NZI2 390 aaKnown RBP16.74■□□□□ 0.27
ACTN1-205ENST00000538545 ZNF384Q8TF68 577 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms