RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 DPCR1Q3MIW9 517 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 USP28Q96RU2 1077 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 DEF6Q9H4E7 631 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 RAB21Q9UL25 225 aa20.56■□□□□ 0.88
TRA2A-211ENST00000538367 ZNF335Q9H4Z2 1342 aaPredicted RBP20.55■□□□□ 0.88
TRA2A-211ENST00000538367 HOXB7P09629 217 aa20.55■□□□□ 0.88
TRA2A-211ENST00000538367 FAM227BQ96M60 508 aa20.55■□□□□ 0.88
TRA2A-211ENST00000538367 PPP2R2CQ9Y2T4 447 aa20.55■□□□□ 0.88
TRA2A-211ENST00000538367 ATF3P18847 181 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 ME1P48163 572 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 STK3Q13188 491 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 EFCAB13Q8IY85 973 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 KIF1AQ12756 1690 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 MRC1P22897 1456 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 EIF3CLB5ME19 914 aaKnown RBP20.54■□□□□ 0.88
TRA2A-211ENST00000538367 HMGB1P09429 215 aaKnown RBP20.54■□□□□ 0.88
TRA2A-211ENST00000538367 VSTM4Q8IW00 320 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 DDX54Q8TDD1 881 aaKnown RBP20.54■□□□□ 0.88
TRA2A-211ENST00000538367 KCNG4Q8TDN1 519 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 EIF3CQ99613 913 aaKnown RBP20.54■□□□□ 0.88
TRA2A-211ENST00000538367 NEDD4P46934 1319 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
TRA2A-211ENST00000538367 C1orf167Q5SNV9 1468 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 MSANTD4Q8NCY6 345 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 FAM71BQ8TC56 605 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 KIFC2Q96AC6 838 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 GBP3Q9H0R5 595 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 ACBD3Q9H3P7 528 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 PIK3C2AO00443 1686 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 YEATS4O95619 227 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 GYS2P54840 703 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 GNL2Q13823 731 aaKnown RBP20.53■□□□□ 0.88
TRA2A-211ENST00000538367 PACS2Q86VP3 889 aa20.53■□□□□ 0.88
TRA2A-211ENST00000538367 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
TRA2A-211ENST00000538367 STX10O60499 249 aa20.52■□□□□ 0.88
TRA2A-211ENST00000538367 SLC3A2P08195 630 aaKnown RBP20.52■□□□□ 0.88
TRA2A-211ENST00000538367 TMEM139Q8IV31 216 aa20.52■□□□□ 0.88
TRA2A-211ENST00000538367 U3KPZ7 1027 aaPredicted RBP20.52■□□□□ 0.88
TRA2A-211ENST00000538367 FLT4P35916 1363 aa20.52■□□□□ 0.88
TRA2A-211ENST00000538367 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 BEND6Q5SZJ8 279 aaPredicted RBP20.51■□□□□ 0.87
TRA2A-211ENST00000538367 CEP112Q8N8E3 955 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
TRA2A-211ENST00000538367 MED4Q9NPJ6 270 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 PCDHA7Q9UN72 937 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 SALL1Q9NSC2 1324 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 MST1RQ04912 1400 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 SOX12O15370 315 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 FOXO3O43524 673 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
TRA2A-211ENST00000538367 GNG11P61952 73 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 SCRN1Q12765 414 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 HDGFL1Q5TGJ6 251 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 CCDC91Q7Z6B0 441 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 DNAAF4Q8WXU2 420 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 TCEANC2Q96MN5 208 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 CEP89Q96ST8 783 aa20.51■□□□□ 0.87
TRA2A-211ENST00000538367 UTP14AQ9BVJ6 771 aaKnown RBP20.51■□□□□ 0.87
TRA2A-211ENST00000538367 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 TAF5LO75529 589 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 HSP90B1P14625 803 aaKnown RBP20.5■□□□□ 0.87
TRA2A-211ENST00000538367 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 SRGAP1Q7Z6B7 1085 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 ORAI2Q96SN7 254 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 VPS18Q9P253 973 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 USP54Q70EL1 1684 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 TOP1P11387 765 aaKnown RBP20.5■□□□□ 0.87
TRA2A-211ENST00000538367 UBASH3AP57075 661 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
TRA2A-211ENST00000538367 Q6ZUG5 572 aa20.5■□□□□ 0.87
TRA2A-211ENST00000538367 PSEN1P49768 467 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 MYL5Q02045 173 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
TRA2A-211ENST00000538367 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
TRA2A-211ENST00000538367 MMS22LQ6ZRQ5 1243 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 AACSQ86V21 672 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 FSD1Q9BTV5 496 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 POLR3EQ9NVU0 708 aa20.49■□□□□ 0.87
TRA2A-211ENST00000538367 MCTP2Q6DN12 878 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 AGXT2Q9BYV1 514 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 PDE11AQ9HCR9 933 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 CLGNO14967 610 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 NDUFA8P51970 172 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
TRA2A-211ENST00000538367 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 WDR24Q96S15 920 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 HSD3B7Q9H2F3 369 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 L1RE1Q9UN81 338 aa20.48■□□□□ 0.87
TRA2A-211ENST00000538367 PPFIA4O75335 1185 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 TBX2Q13207 712 aaPredicted RBP20.47■□□□□ 0.87
TRA2A-211ENST00000538367 RPAINQ86UA6 219 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 LINC00301Q8NCQ3 95 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 BAG1Q99933 345 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms