RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 SYN1P17600 705 aa12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 CLMNQ96JQ2 1002 aa12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 FZD1Q9UP38 647 aa12.96□□□□□ -0.33
PRKAB1-204ENST00000538271 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
PRKAB1-204ENST00000538271 COL2A1P02458 1487 aaPredicted RBP12.96□□□□□ -0.34
PRKAB1-204ENST00000538271 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 GRK4P32298 578 aa12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 AGBL3Q8NEM8 1001 aa12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 ZFYVE28Q9HCC9 887 aa12.95□□□□□ -0.34
PRKAB1-204ENST00000538271 NTSR2O95665 410 aa12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 GJA5P36382 358 aa12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 LACTBP83111 547 aaPredicted RBP12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 KIF22Q14807 665 aa12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 MTHFSDQ2M296 383 aaKnown RBP12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 MYLIPQ8WY64 445 aa12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 P2RX7Q99572 595 aaKnown RBP12.94□□□□□ -0.34
PRKAB1-204ENST00000538271 LRRC37AA6NMS7 1700 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 KCNQ3O43525 872 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 USP17L8P0C7I0 530 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 GPTP24298 496 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 TEFQ10587 303 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 RIPOR2Q9Y4F9 1068 aa12.93□□□□□ -0.34
PRKAB1-204ENST00000538271 UBXN2AP68543 259 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 PAWRQ96IZ0 340 aaKnown RBP12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 GMLQ99445 158 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 LAMB2P55268 1798 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 ANKRD36CQ5JPF3 1778 aa12.92□□□□□ -0.34
PRKAB1-204ENST00000538271 PSME4Q14997 1843 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 C6orf229H3BNL8 230 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 FOSL2P15408 326 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 GRAPQ13588 217 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 GRAPLQ8TC17 118 aaPredicted RBP12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 UNC93B1Q9H1C4 597 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
PRKAB1-204ENST00000538271 CAPN2P17655 700 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 SLC10A5Q5PT55 438 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 NECAB2Q7Z6G3 386 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.34
PRKAB1-204ENST00000538271 WNT10BO00744 389 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 IL13P35225 146 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 EYA3Q99504 573 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 LRFN3Q9BTN0 628 aa12.89□□□□□ -0.35
PRKAB1-204ENST00000538271 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 CTGFP29279 349 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 MRE11P49959 708 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 DIS3LQ8TF46 1054 aaKnown RBP12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
PRKAB1-204ENST00000538271 PPP1R12BO60237 982 aaPredicted RBP12.87□□□□□ -0.35
PRKAB1-204ENST00000538271 TLR2O60603 784 aa12.87□□□□□ -0.35
PRKAB1-204ENST00000538271 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
PRKAB1-204ENST00000538271 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
PRKAB1-204ENST00000538271 FAM43AQ8N2R8 423 aa12.87□□□□□ -0.35
PRKAB1-204ENST00000538271 OSBPP22059 807 aa12.86□□□□□ -0.35
PRKAB1-204ENST00000538271 HOXD10P28358 340 aa12.86□□□□□ -0.35
PRKAB1-204ENST00000538271 GPSM2P81274 684 aa12.86□□□□□ -0.35
PRKAB1-204ENST00000538271 APOBEC3FQ8IUX4 373 aaKnown RBP12.86□□□□□ -0.35
PRKAB1-204ENST00000538271 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
PRKAB1-204ENST00000538271 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 HMOX1P09601 288 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 PSMC4P43686 418 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 ZC3H12CQ9C0D7 883 aaKnown RBP12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 MYPNQ86TC9 1320 aa12.85□□□□□ -0.35
PRKAB1-204ENST00000538271 CCL15-CCL14A0A0B4J2E2 113 aa12.84□□□□□ -0.35
PRKAB1-204ENST00000538271 G3V3G9 751 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms