RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 MYH14Q7Z406 1995 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 NTSR2O95665 410 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 SLC5A1P13866 664 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 UVSSAQ2YD98 709 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 MB21D2Q8IYB1 491 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 RNF214Q8ND24 703 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 HELBQ8NG08 1087 aaPredicted RBP13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 SALL1Q9NSC2 1324 aa13.46□□□□□ -0.25
SLC28A1-204ENST00000538177 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 H3BQV1 296 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 HAND2P61296 217 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 IFFO2Q5TF58 517 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 ZNF213O14771 459 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 MCM5P33992 734 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 MPHOSPH8Q99549 860 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 TFIP11Q9UBB9 837 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 NIP7Q9Y221 180 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC28A1-204ENST00000538177 FAM177BA6PVY3 158 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 KCNQ2O43526 872 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 PDE6AP16499 860 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 CLEC4GQ6UXB4 293 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 ARAP2Q8WZ64 1704 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 ZNF532Q9HCE3 1301 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 PRC1O43663 620 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 ZSCAN30Q86W11 494 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 SPATA5Q8NB90 893 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
SLC28A1-204ENST00000538177 TOM1O60784 492 aa13.43□□□□□ -0.26
SLC28A1-204ENST00000538177 ANTXR2P58335 489 aa13.43□□□□□ -0.26
SLC28A1-204ENST00000538177 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
SLC28A1-204ENST00000538177 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
SLC28A1-204ENST00000538177 LIG1P18858 919 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 ALX1Q15699 326 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 CFAP45Q9UL16 551 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 ZNF831Q5JPB2 1677 aa13.42□□□□□ -0.26
SLC28A1-204ENST00000538177 GOLGA6L4A6NEF3 574 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 SNAP23O00161 211 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 RGL2O15211 777 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 FDPSP14324 419 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 PGBD1Q96JS3 809 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 PIP4K2BP78356 416 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 MAP3K12Q12852 859 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 VPS72Q15906 364 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 NOL7Q9UMY1 257 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-204ENST00000538177 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 LAMB2P55268 1798 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 TRDNQ13061 729 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 FAM98CQ17RN3 349 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 TBC1D10CQ8IV04 446 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 RCOR1Q9UKL0 485 aa13.4□□□□□ -0.26
SLC28A1-204ENST00000538177 CHRNDQ07001 517 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 APPP05067 770 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 CCDC192P0DO97 292 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 BCAMP50895 628 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 MAP3K11Q16584 847 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 RBM43Q6ZSC3 357 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 CCDC39Q9UFE4 941 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 CNTNAP4Q9C0A0 1308 aa13.39□□□□□ -0.27
SLC28A1-204ENST00000538177 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 RGS22Q8NE09 1264 aa13.38□□□□□ -0.27
SLC28A1-204ENST00000538177 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms