RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 CEP120Q8N960 986 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 HDXQ7Z353 690 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 HSD3B7Q9H2F3 369 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
RTN3-208ENST00000537981 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 SAMM50Q9Y512 469 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 FCHSD2O94868 740 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 SYF2O95926 243 aaKnown RBP12.29□□□□□ -0.44
RTN3-208ENST00000537981 ELF1P32519 619 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 C11orf91Q3C1V1 193 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 ZKSCAN4Q969J2 545 aaPredicted RBP12.29□□□□□ -0.44
RTN3-208ENST00000537981 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
RTN3-208ENST00000537981 CCNHP51946 323 aaPredicted RBP12.29□□□□□ -0.44
RTN3-208ENST00000537981 RESTQ13127 1097 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 MTF1Q14872 753 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
RTN3-208ENST00000537981 HMMRO75330 724 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 A1BGP04217 495 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 EIF5P55010 431 aaKnown RBP12.28□□□□□ -0.44
RTN3-208ENST00000537981 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 TBC1D8BQ0IIM8 1120 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 NCAPHQ15003 741 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 POLD4Q9HCU8 107 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 CD163L1Q9NR16 1453 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 ADD1P35611 737 aaKnown RBP12.28□□□□□ -0.44
RTN3-208ENST00000537981 PSME1Q06323 249 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 ACTN3Q08043 901 aaPredicted RBP12.28□□□□□ -0.44
RTN3-208ENST00000537981 BRD3Q15059 726 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 CCDC12Q8WUD4 166 aaPredicted RBP12.28□□□□□ -0.44
RTN3-208ENST00000537981 KAT14Q9H8E8 782 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 MRPL44Q9H9J2 332 aaKnown RBP12.28□□□□□ -0.44
RTN3-208ENST00000537981 ANO10Q9NW15 660 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
RTN3-208ENST00000537981 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.44
RTN3-208ENST00000537981 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 NEURL4Q96JN8 1562 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 C21orf2O43822 256 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.45
RTN3-208ENST00000537981 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 JMYQ8N9B5 988 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 IGSF22Q8N9C0 903 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 CTCFLQ8NI51 663 aaPredicted RBP12.27□□□□□ -0.45
RTN3-208ENST00000537981 BRF1Q92994 677 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 DEPDC5O75140 1603 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 A0A1B0GVL5 298 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 CAVIN2O95810 425 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 KCNJ6P48051 423 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 POLA2Q14181 598 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 ARMC3Q5W041 872 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 SIL1Q9H173 461 aa12.27□□□□□ -0.45
RTN3-208ENST00000537981 NEDD4P46934 1319 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 CUTAO60888 179 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 FANCCQ00597 558 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 SH2B1Q9NRF2 756 aaPredicted RBP12.26□□□□□ -0.45
RTN3-208ENST00000537981 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 ABL1P00519 1130 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 NOA1Q8NC60 698 aaKnown RBP12.26□□□□□ -0.45
RTN3-208ENST00000537981 AFAP1L1Q8TED9 768 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 USP28Q96RU2 1077 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 MPHOSPH8Q99549 860 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
RTN3-208ENST00000537981 NSD2O96028 1365 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 IFT172Q9UG01 1749 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 MYH15Q9Y2K3 1946 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 USP5P45974 858 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 FNTAP49354 379 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 RBM5P52756 815 aaKnown RBP eCLIP12.25□□□□□ -0.45
RTN3-208ENST00000537981 ADKP55263 362 aaKnown RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 TOB2Q14106 344 aaPredicted RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 ERC1Q8IUD2 1116 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 GSPT2Q8IYD1 628 aaKnown RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 LZTFL1Q9NQ48 299 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 RAB21Q9UL25 225 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 PPME1Q9Y570 386 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 PNPLA6Q8IY17 1366 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 KINO60870 393 aaKnown RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 MCM10Q7L590 875 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 HNRNPLLQ8WVV9 542 aaKnown RBP12.25□□□□□ -0.45
RTN3-208ENST00000537981 KCNB2Q92953 911 aa12.25□□□□□ -0.45
RTN3-208ENST00000537981 SEC62Q99442 399 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms