RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 SCARF1Q14162 830 aa13.16□□□□□ -0.3
TCF4-206ENST00000537856 APOBEC3FQ8IUX4 373 aaKnown RBP13.16□□□□□ -0.3
TCF4-206ENST00000537856 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
TCF4-206ENST00000537856 MAST3O60307 1309 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 FAM205AQ6ZU69 1335 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 RASSF10A6NK89 507 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 CELF2O95319 508 aaKnown RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 MTX1Q13505 466 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 TXNRD3Q86VQ6 643 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 MEIS3Q99687 375 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
TCF4-206ENST00000537856 SUGT1Q9Y2Z0 365 aa13.15□□□□□ -0.3
TCF4-206ENST00000537856 CNTNAP1P78357 1384 aa13.15□□□□□ -0.31
TCF4-206ENST00000537856 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 FKBP1BP68106 108 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCF4-206ENST00000537856 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 AIDAQ96BJ3 306 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
TCF4-206ENST00000537856 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
TCF4-206ENST00000537856 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
TCF4-206ENST00000537856 SEMA3EO15041 775 aa13.13□□□□□ -0.31
TCF4-206ENST00000537856 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
TCF4-206ENST00000537856 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
TCF4-206ENST00000537856 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
TCF4-206ENST00000537856 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
TCF4-206ENST00000537856 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
TCF4-206ENST00000537856 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
TCF4-206ENST00000537856 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
TCF4-206ENST00000537856 PSME4Q14997 1843 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
TCF4-206ENST00000537856 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
TCF4-206ENST00000537856 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 ANGEL2Q5VTE6 544 aaKnown RBP13.12□□□□□ -0.31
TCF4-206ENST00000537856 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
TCF4-206ENST00000537856 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 ZNF408Q9H9D4 720 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 ZBTB22O15209 634 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 KLRK1P26718 216 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 GYG1P46976 350 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 TNFAIP1Q13829 316 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
TCF4-206ENST00000537856 RBM5P52756 815 aaKnown RBP eCLIP13.11□□□□□ -0.31
TCF4-206ENST00000537856 HTRA3P83110 453 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
TCF4-206ENST00000537856 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 MRIQ9BWK5 157 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 SIL1Q9H173 461 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 GBA2Q9HCG7 927 aaPredicted RBP13.11□□□□□ -0.31
TCF4-206ENST00000537856 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
TCF4-206ENST00000537856 TRAF5O00463 557 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 FGFR2P21802 821 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 MAP2K2P36507 400 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
TCF4-206ENST00000537856 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
TCF4-206ENST00000537856 HSP90AB4PQ58FF6 505 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 DDX19BQ9UMR2 479 aa13.11□□□□□ -0.31
TCF4-206ENST00000537856 COL1A1P02452 1464 aaPredicted RBP13.1□□□□□ -0.31
TCF4-206ENST00000537856 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 WNT10BO00744 389 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 TNNI2P48788 182 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 GSE1Q14687 1217 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 SLF2Q8IX21 1173 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
TCF4-206ENST00000537856 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
TCF4-206ENST00000537856 SNAP23O00161 211 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 SUPT20HL1Q3ZLR7 823 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 CST9Q5W186 159 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
TCF4-206ENST00000537856 SAPCD2Q86UD0 394 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 TTF2Q9UNY4 1162 aaKnown RBP13.09□□□□□ -0.31
TCF4-206ENST00000537856 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 TRPM7Q96QT4 1865 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 HMMRO75330 724 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 VEGFBP49765 207 aa13.09□□□□□ -0.31
TCF4-206ENST00000537856 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
TCF4-206ENST00000537856 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms