RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 TCRBV5S4A2TA0A5A2 114 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 SEMA3EO15041 775 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
PMFBP1-206ENST00000537392 ZBTB22O15209 634 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 MAP3K12Q12852 859 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 C15orf52Q6ZUT6 534 aaKnown RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 NSFL1CQ9UNZ2 370 aaKnown RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 PDS5AQ29RF7 1337 aaKnown RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 UFL1O94874 794 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 ZKSCAN1P17029 563 aaPredicted RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 ADCK5Q3MIX3 580 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 RNF20Q5VTR2 975 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 GGA1Q9UJY5 639 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
PMFBP1-206ENST00000537392 FOXP2O15409 715 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 GPAA1O43292 621 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 SPRYD3Q8NCJ5 442 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 TM6SF1Q9BZW5 370 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 MYH7P12883 1935 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 FRAT2O75474 233 aaPredicted RBP11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 SLKQ9H2G2 1235 aaPredicted RBP11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
PMFBP1-206ENST00000537392 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 LTBP1Q14766 1721 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 H0YIN7 160 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 CYP21A2P08686 494 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 CASTP20810 708 aaKnown RBP11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 TTC14Q96N46 770 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 ABCF2Q9UG63 623 aa11.29□□□□□ -0.6
PMFBP1-206ENST00000537392 CPA1P15085 419 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 MCM2P49736 904 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 OLFM4Q6UX06 510 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 ZNF622Q969S3 477 aaKnown RBP eCLIP11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 CHRNA5P30532 468 aa11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
PMFBP1-206ENST00000537392 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
PMFBP1-206ENST00000537392 A0A0G2JLW4 131 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 C6orf229H3BNL8 230 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 MBD4O95243 580 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 PSMA5P28066 241 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 KRT32Q14532 448 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 TTLL5Q6EMB2 1281 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 CYP46A1Q9Y6A2 500 aa11.27□□□□□ -0.61
PMFBP1-206ENST00000537392 DUOX1Q9NRD9 1551 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 FGAP02671 866 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 CYP7A1P22680 504 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 MPNDQ8N594 471 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 CD209Q9NNX6 404 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 JAG2Q9Y219 1238 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 IL1R1P14778 569 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 DDIT3P35638 169 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 AK2P54819 239 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 STOX1Q6ZVD7 989 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 NOL8Q76FK4 1167 aaKnown RBP11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 ARMT1Q9H993 441 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
PMFBP1-206ENST00000537392 HSP90AA1P07900 732 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms