RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
RFX4-204ENST00000536688 RWDD2BP57060 319 aa11.67□□□□□ -0.54
RFX4-204ENST00000536688 SLC8A3P57103 927 aa11.67□□□□□ -0.54
RFX4-204ENST00000536688 NAIF1Q69YI7 327 aaPredicted RBP11.67□□□□□ -0.54
RFX4-204ENST00000536688 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
RFX4-204ENST00000536688 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
RFX4-204ENST00000536688 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
RFX4-204ENST00000536688 CDC23Q9UJX2 597 aa11.67□□□□□ -0.54
RFX4-204ENST00000536688 CDHR2Q9BYE9 1310 aa11.67□□□□□ -0.54
RFX4-204ENST00000536688 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
RFX4-204ENST00000536688 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
RFX4-204ENST00000536688 RESTQ13127 1097 aa11.66□□□□□ -0.54
RFX4-204ENST00000536688 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
RFX4-204ENST00000536688 ADGRF5Q8IZF2 1346 aa11.66□□□□□ -0.54
RFX4-204ENST00000536688 DHX58Q96C10 678 aa11.66□□□□□ -0.54
RFX4-204ENST00000536688 SPATS2LQ9NUQ6 558 aaKnown RBP11.66□□□□□ -0.54
RFX4-204ENST00000536688 POGZQ7Z3K3 1410 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 SMTNP53814 917 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 TRAF1Q13077 416 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 IQCA1Q86XH1 822 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 TMEM139Q8IV31 216 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
RFX4-204ENST00000536688 IL25Q9H293 177 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 GGA2Q9UJY4 613 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 ARHGEF10O15013 1369 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
RFX4-204ENST00000536688 GNAI2P04899 355 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
RFX4-204ENST00000536688 PSMA5P28066 241 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 CCT5P48643 541 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 AMPHP49418 695 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 PPFIA1Q13136 1202 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 ZNF483Q8TF39 744 aaPredicted RBP11.65□□□□□ -0.54
RFX4-204ENST00000536688 CLIC6Q96NY7 704 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 PNKPQ96T60 521 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 BATF3Q9NR55 127 aa11.65□□□□□ -0.54
RFX4-204ENST00000536688 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 SYF2O95926 243 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 PAX7P23759 505 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 IRAK1P51617 712 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 DRP2Q13474 957 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 CCDC26Q8TAB7 109 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 JAKMIP1Q96N16 626 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 ANKRD18BA2A2Z9 1011 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 KIAA0754O94854 1291 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 FANCCQ00597 558 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 ZC3H12AQ5D1E8 599 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 VSTM4Q8IW00 320 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 NUCKS1Q9H1E3 243 aaKnown RBP11.64□□□□□ -0.55
RFX4-204ENST00000536688 HOMER3Q9NSC5 361 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 TPCN1Q9ULQ1 816 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 CAPN7Q9Y6W3 813 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
RFX4-204ENST00000536688 DLG5Q8TDM6 1919 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 EIF3HO15372 352 aaKnown RBP eCLIP11.63□□□□□ -0.55
RFX4-204ENST00000536688 ZEB2O60315 1214 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 IFIT2P09913 472 aaKnown RBP11.63□□□□□ -0.55
RFX4-204ENST00000536688 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
RFX4-204ENST00000536688 NCAPHQ15003 741 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 BRAPQ7Z569 592 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 TCP11Q8WWU5 503 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 BAG1Q99933 345 aaPredicted RBP11.63□□□□□ -0.55
RFX4-204ENST00000536688 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
RFX4-204ENST00000536688 LRRIQ3A6PVS8 624 aaPredicted RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 MEFVO15553 781 aaPredicted RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 RAB11FIP3O75154 756 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 RBBP5Q15291 538 aaKnown RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 TSHZ3Q63HK5 1081 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 LARP1Q6PKG0 1096 aaKnown RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 PAIP2Q9BPZ3 127 aaKnown RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 NLRP12P59046 1061 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 VSNL1P62760 191 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 TTC19Q6DKK2 380 aaPredicted RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 IGSF22Q8N9C0 903 aa11.62□□□□□ -0.55
RFX4-204ENST00000536688 CCDC12Q8WUD4 166 aaPredicted RBP11.62□□□□□ -0.55
RFX4-204ENST00000536688 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms