RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TAF5LO75529 589 aa15.7■□□□□ 0.1
PRKDC-207ENST00000536483 TM4SF4P48230 202 aa15.7■□□□□ 0.1
PRKDC-207ENST00000536483 PTPN12Q05209 780 aaKnown RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 EPHA10Q5JZY3 1008 aa15.7■□□□□ 0.1
PRKDC-207ENST00000536483 SLC4A10Q6U841 1118 aa15.7■□□□□ 0.1
PRKDC-207ENST00000536483 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
PRKDC-207ENST00000536483 APOBEC3FQ8IUX4 373 aaKnown RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 HELBQ8NG08 1087 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 ZNF296Q8WUU4 475 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 ZBED3Q96IU2 234 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
PRKDC-207ENST00000536483 TNRC18O15417 2968 aaPredicted RBP15.69■□□□□ 0.1
PRKDC-207ENST00000536483 RARSP54136 660 aaKnown RBP15.69■□□□□ 0.1
PRKDC-207ENST00000536483 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
PRKDC-207ENST00000536483 ARHGAP45Q92619 1136 aa15.69■□□□□ 0.1
PRKDC-207ENST00000536483 FZD1Q9UP38 647 aa15.69■□□□□ 0.1
PRKDC-207ENST00000536483 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
PRKDC-207ENST00000536483 IRS2Q9Y4H2 1338 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
PRKDC-207ENST00000536483 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
PRKDC-207ENST00000536483 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
PRKDC-207ENST00000536483 CERS5Q8N5B7 392 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 USP44Q9H0E7 712 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
PRKDC-207ENST00000536483 HPS5Q9UPZ3 1129 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 PCDHAC2Q9Y5I4 1007 aa15.68■□□□□ 0.1
PRKDC-207ENST00000536483 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
PRKDC-207ENST00000536483 GPR25O00155 361 aa15.67■□□□□ 0.1
PRKDC-207ENST00000536483 SREBF2Q12772 1141 aa15.67■□□□□ 0.1
PRKDC-207ENST00000536483 LDLRAD1Q5T700 205 aa15.67■□□□□ 0.1
PRKDC-207ENST00000536483 DEFB129Q9H1M3 183 aa15.67■□□□□ 0.1
PRKDC-207ENST00000536483 PDE4DIPQ5VU43 2346 aa15.67■□□□□ 0.1
PRKDC-207ENST00000536483 PKN2Q16513 984 aaKnown RBP15.66■□□□□ 0.1
PRKDC-207ENST00000536483 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
PRKDC-207ENST00000536483 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.66■□□□□ 0.1
PRKDC-207ENST00000536483 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
PRKDC-207ENST00000536483 PLIN1O60240 522 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 IL1R1P14778 569 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 CFAP100Q494V2 611 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 SPRYD7Q5W111 196 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 ZNF804AQ7Z570 1209 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 MTMR14Q8NCE2 650 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
PRKDC-207ENST00000536483 API5Q9BZZ5 524 aaKnown RBP15.65■□□□□ 0.1
PRKDC-207ENST00000536483 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
PRKDC-207ENST00000536483 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
PRKDC-207ENST00000536483 CLRN2A0PK11 232 aa15.64■□□□□ 0.09
PRKDC-207ENST00000536483 NOM1Q5C9Z4 860 aaKnown RBP15.64■□□□□ 0.09
PRKDC-207ENST00000536483 ANKRD44Q8N8A2 993 aa15.64■□□□□ 0.09
PRKDC-207ENST00000536483 SLC10A4Q96EP9 437 aa15.64■□□□□ 0.09
PRKDC-207ENST00000536483 PRMT6Q96LA8 375 aaPredicted RBP15.64■□□□□ 0.09
PRKDC-207ENST00000536483 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
PRKDC-207ENST00000536483 SPDYE2BA6NHP3 402 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 PPP1R12BO60237 982 aaPredicted RBP15.63■□□□□ 0.09
PRKDC-207ENST00000536483 SPDYE6P0CI01 402 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 TAF7LQ5H9L4 462 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 LDHAL6AQ6ZMR3 332 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 CLMNQ96JQ2 1002 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 CFHR5Q9BXR6 569 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 PPP2R3BQ9Y5P8 575 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
PRKDC-207ENST00000536483 AOX1Q06278 1338 aa15.63■□□□□ 0.09
PRKDC-207ENST00000536483 MYO1BO43795 1136 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 FKTNO75072 461 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 FKBP1AP62942 108 aaKnown RBP15.62■□□□□ 0.09
PRKDC-207ENST00000536483 HNRNPUQ00839 825 aaKnown RBP eCLIP15.62■□□□□ 0.09
PRKDC-207ENST00000536483 INTS3Q68E01 1043 aaKnown RBP15.62■□□□□ 0.09
PRKDC-207ENST00000536483 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
PRKDC-207ENST00000536483 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 ZBED9Q6R2W3 1325 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 SSC5DA1L4H1 1573 aa15.62■□□□□ 0.09
PRKDC-207ENST00000536483 MANSC4A6NHS7 340 aaPredicted RBP15.61■□□□□ 0.09
PRKDC-207ENST00000536483 ALDH1A1P00352 501 aa15.61■□□□□ 0.09
PRKDC-207ENST00000536483 RBM5P52756 815 aaKnown RBP eCLIP15.61■□□□□ 0.09
PRKDC-207ENST00000536483 SUPT20HL1Q3ZLR7 823 aa15.61■□□□□ 0.09
PRKDC-207ENST00000536483 NBPF12Q5TAG4 269 aaPredicted RBP15.61■□□□□ 0.09
PRKDC-207ENST00000536483 FBXO46Q6PJ61 603 aaPredicted RBP15.61■□□□□ 0.09
PRKDC-207ENST00000536483 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
PRKDC-207ENST00000536483 IPO8O15397 1037 aaKnown RBP15.6■□□□□ 0.09
PRKDC-207ENST00000536483 INHBEP58166 350 aa15.6■□□□□ 0.09
PRKDC-207ENST00000536483 IFNL1Q8IU54 200 aa15.6■□□□□ 0.09
PRKDC-207ENST00000536483 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
PRKDC-207ENST00000536483 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
PRKDC-207ENST00000536483 IGF2BP3O00425 579 aaKnown RBP eCLIP15.59■□□□□ 0.09
PRKDC-207ENST00000536483 USP2O75604 605 aaPredicted RBP15.59■□□□□ 0.09
PRKDC-207ENST00000536483 ZBTB48P10074 688 aaPredicted RBP15.59■□□□□ 0.09
PRKDC-207ENST00000536483 GYG1P46976 350 aa15.59■□□□□ 0.09
PRKDC-207ENST00000536483 UBE4AQ14139 1066 aa15.59■□□□□ 0.09
PRKDC-207ENST00000536483 RASA3Q14644 834 aa15.59■□□□□ 0.09
PRKDC-207ENST00000536483 FAM205AQ6ZU69 1335 aa15.59■□□□□ 0.09
PRKDC-207ENST00000536483 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.08
PRKDC-207ENST00000536483 MFSD14BQ5SR56 506 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms