RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 NOGQ13253 232 aa17.94■□□□□ 0.46
RTN3P1-201ENST00000536295 UBE4AQ14139 1066 aa17.94■□□□□ 0.46
RTN3P1-201ENST00000536295 METTL24Q5JXM2 366 aa17.94■□□□□ 0.46
RTN3P1-201ENST00000536295 HIBADHP31937 336 aaKnown RBP17.93■□□□□ 0.46
RTN3P1-201ENST00000536295 MMP14P50281 582 aa17.93■□□□□ 0.46
RTN3P1-201ENST00000536295 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
RTN3P1-201ENST00000536295 DLGAP5Q15398 846 aa17.93■□□□□ 0.46
RTN3P1-201ENST00000536295 FAM155AB1AL88 458 aaPredicted RBP17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 MOB2Q70IA6 237 aa17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 MIER1Q8N108 512 aa17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 FAM84BQ96KN1 310 aaPredicted RBP17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 API5Q9BZZ5 524 aaKnown RBP17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 PCDHAC2Q9Y5I4 1007 aa17.92■□□□□ 0.46
RTN3P1-201ENST00000536295 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
RTN3P1-201ENST00000536295 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
RTN3P1-201ENST00000536295 TTLL12Q14166 644 aaPredicted RBP17.91■□□□□ 0.46
RTN3P1-201ENST00000536295 ZBED3Q96IU2 234 aaPredicted RBP17.91■□□□□ 0.46
RTN3P1-201ENST00000536295 IQSEC3Q9UPP2 1182 aaPredicted RBP17.91■□□□□ 0.46
RTN3P1-201ENST00000536295 RBM5P52756 815 aaKnown RBP eCLIP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 FKBP1BP68106 108 aa17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 CFAP100Q494V2 611 aa17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 VPS37DQ86XT2 251 aa17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 APOBEC3FQ8IUX4 373 aaKnown RBP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
RTN3P1-201ENST00000536295 PAPPA2Q9BXP8 1791 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 CA12O43570 354 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 PDE8BO95263 885 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 SLC10A3P09131 477 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 NF2P35240 595 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 PRKG1Q13976 671 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 MFSD14BQ5SR56 506 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 FAM205AQ6ZU69 1335 aa17.89■□□□□ 0.45
RTN3P1-201ENST00000536295 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 RFX5P48382 616 aaPredicted RBP17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 CHAF1AQ13111 956 aaPredicted RBP17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 RASAL3Q86YV0 1011 aa17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 VGLL2Q8N8G2 317 aa17.88■□□□□ 0.45
RTN3P1-201ENST00000536295 SPDYE2BA6NHP3 402 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 MYO1BO43795 1136 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 SPDYE6P0CI01 402 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 FBXO33Q7Z6M2 555 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 MTMR14Q8NCE2 650 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 PRMT6Q96LA8 375 aaPredicted RBP17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 SIL1Q9H173 461 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 VEZTQ9HBM0 779 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 TTF2Q9UNY4 1162 aaKnown RBP17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 KIF16BQ96L93 1317 aa17.87■□□□□ 0.45
RTN3P1-201ENST00000536295 EYA2O00167 538 aa17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 BCAMP50895 628 aa17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 PTPN12Q05209 780 aaKnown RBP17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 PUM3Q15397 648 aaKnown RBP17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 DEFB129Q9H1M3 183 aa17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 AOX1Q06278 1338 aa17.86■□□□□ 0.45
RTN3P1-201ENST00000536295 IFIT1P09914 478 aaKnown RBP17.85■□□□□ 0.45
RTN3P1-201ENST00000536295 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
RTN3P1-201ENST00000536295 MEIS3Q99687 375 aa17.85■□□□□ 0.45
RTN3P1-201ENST00000536295 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.85■□□□□ 0.45
RTN3P1-201ENST00000536295 FZD1Q9UP38 647 aa17.85■□□□□ 0.45
RTN3P1-201ENST00000536295 BCAR3O75815 825 aa17.84■□□□□ 0.45
RTN3P1-201ENST00000536295 ARMC9Q7Z3E5 817 aa17.84■□□□□ 0.45
RTN3P1-201ENST00000536295 CSRNP1Q96S65 589 aa17.84■□□□□ 0.45
RTN3P1-201ENST00000536295 COL1A1P02452 1464 aaPredicted RBP17.83■□□□□ 0.45
RTN3P1-201ENST00000536295 TRPA1O75762 1119 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 SLC5A1P13866 664 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 FGFR2P21802 821 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 MKRN3Q13064 507 aaKnown RBP17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 GRIK5Q16478 980 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 ATG9AQ7Z3C6 839 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 RNF186Q9NXI6 227 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 SERPINA10Q9UK55 444 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
RTN3P1-201ENST00000536295 CRKP46108 304 aa17.82■□□□□ 0.44
RTN3P1-201ENST00000536295 INTS3Q68E01 1043 aaKnown RBP17.82■□□□□ 0.44
RTN3P1-201ENST00000536295 TDRD3Q9H7E2 651 aaKnown RBP17.82■□□□□ 0.44
RTN3P1-201ENST00000536295 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
RTN3P1-201ENST00000536295 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
RTN3P1-201ENST00000536295 IPO8O15397 1037 aaKnown RBP17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 TRIM27P14373 513 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 DZIP1LQ8IYY4 767 aaKnown RBP17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 LPIN2Q92539 896 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 SAGE1Q9NXZ1 904 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 ECM29Q5VYK3 1845 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 ARAP2Q8WZ64 1704 aa17.81■□□□□ 0.44
RTN3P1-201ENST00000536295 CIAO1O76071 339 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms