RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TTF1Q15361 905 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 CCDC158Q5M9N0 1113 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 DDX46Q7L014 1031 aaKnown RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 APPBP2Q92624 585 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 SEC62Q99442 399 aaKnown RBP9.6□□□□□ -0.87
COL21A1-212ENST00000535941 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
COL21A1-212ENST00000535941 GOLIM4O00461 696 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 HSPD1P10809 573 aaKnown RBP9.59□□□□□ -0.87
COL21A1-212ENST00000535941 RASGRF1Q13972 1273 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 TXNRD1Q16881 649 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 PRR5LQ6MZQ0 368 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 CELF1Q92879 486 aaKnown RBP9.59□□□□□ -0.87
COL21A1-212ENST00000535941 ZNF330Q9Y3S2 320 aaPredicted RBP9.59□□□□□ -0.87
COL21A1-212ENST00000535941 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
COL21A1-212ENST00000535941 SEMA3EO15041 775 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 CYP21A2P08686 494 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 RPS6KB1P23443 525 aa9.59□□□□□ -0.87
COL21A1-212ENST00000535941 ZNF384Q8TF68 577 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 SLC5A1P13866 664 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 AK2P54819 239 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
COL21A1-212ENST00000535941 C10orf71Q711Q0 1435 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
COL21A1-212ENST00000535941 SLFNL1Q499Z3 407 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 PI16Q6UXB8 463 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 SPATA5Q8NB90 893 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 CNNM1Q9NRU3 951 aa9.58□□□□□ -0.88
COL21A1-212ENST00000535941 ZPR1O75312 459 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 TRIM37O94972 964 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 GRAPQ13588 217 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 CCDC129Q6ZRS4 1044 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 GRAPLQ8TC17 118 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 CAMKK2Q96RR4 588 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 PUS7LQ9H0K6 701 aaKnown RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 BRD1O95696 1058 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 IGHMBP2P38935 993 aaKnown RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 DNAJC2Q99543 621 aaKnown RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 NAP1L2Q9ULW6 460 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 LARGE1O95461 756 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 NEK4P51957 841 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 L1TD1Q5T7N2 865 aaKnown RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 ANKRD18AQ8IVF6 992 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 FAM84BQ96KN1 310 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 NEUROD6Q96NK8 337 aa9.57□□□□□ -0.88
COL21A1-212ENST00000535941 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
COL21A1-212ENST00000535941 FGRP09769 529 aa9.56□□□□□ -0.88
COL21A1-212ENST00000535941 KRT32Q14532 448 aa9.56□□□□□ -0.88
COL21A1-212ENST00000535941 ZGPATQ8N5A5 531 aaKnown RBP9.56□□□□□ -0.88
COL21A1-212ENST00000535941 TNPO1Q92973 898 aaKnown RBP9.56□□□□□ -0.88
COL21A1-212ENST00000535941 POTEAQ6S8J7 498 aa9.56□□□□□ -0.88
COL21A1-212ENST00000535941 CRAMP1Q96RY5 1269 aa9.56□□□□□ -0.88
COL21A1-212ENST00000535941 A0A0G2JLW4 131 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 PDE6AP16499 860 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 MB21D2Q8IYB1 491 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 ANKRD2Q9GZV1 360 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 SH2B1Q9NRF2 756 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 LIMCH1Q9UPQ0 1083 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 TACC3Q9Y6A5 838 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 WTIPA6NIX2 430 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 RFC4P35249 363 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 RPS8P62241 208 aaKnown RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 LRRFIP1Q32MZ4 808 aaKnown RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 NBPF5PQ86XG9 351 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 STRBPQ96SI9 672 aaKnown RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 WWC3Q9ULE0 1092 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 ROBO3Q96MS0 1386 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 ZSCAN25Q6NSZ9 544 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 KIAA1211Q6ZU35 1233 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 ZSCAN31Q96LW9 406 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 RIOK1Q9BRS2 568 aaKnown RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 EPB41L4AQ9HCS5 686 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-212ENST00000535941 ANAPC4Q9UJX5 808 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
COL21A1-212ENST00000535941 PSMA5P28066 241 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 RXRBP28702 533 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 MCM4P33991 863 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 MPHOSPH8Q99549 860 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 DICER1Q9UPY3 1922 aaKnown RBP9.54□□□□□ -0.88
COL21A1-212ENST00000535941 IL1R1P14778 569 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 KLRK1P26718 216 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 BCAMP50895 628 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 PKP1Q13835 747 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 ME3Q16798 604 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 RNF20Q5VTR2 975 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 ADGRA1Q86SQ6 560 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 SMARCC2Q8TAQ2 1214 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
COL21A1-212ENST00000535941 ZNF532Q9HCE3 1301 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 SNAP23O00161 211 aa9.54□□□□□ -0.88
COL21A1-212ENST00000535941 FLAD1Q8NFF5 587 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms