RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 IQSEC3Q9UPP2 1182 aaPredicted RBP27.51■■□□□ 1.99
VPS37C-202ENST00000535818 TFCP2Q12800 502 aa27.5■■□□□ 1.99
VPS37C-202ENST00000535818 CEP85Q6P2H3 762 aa27.5■■□□□ 1.99
VPS37C-202ENST00000535818 MYOZ2Q9NPC6 264 aa27.5■■□□□ 1.99
VPS37C-202ENST00000535818 AKAP2Q9Y2D5 859 aa27.49■■□□□ 1.99
VPS37C-202ENST00000535818 FAM205AQ6ZU69 1335 aa27.48■■□□□ 1.99
VPS37C-202ENST00000535818 ITGBL1O95965 494 aaPredicted RBP27.48■■□□□ 1.99
VPS37C-202ENST00000535818 FKBP1AP62942 108 aaKnown RBP27.48■■□□□ 1.99
VPS37C-202ENST00000535818 CHAF1AQ13111 956 aaPredicted RBP27.48■■□□□ 1.99
VPS37C-202ENST00000535818 PASKQ96RG2 1323 aa27.47■■□□□ 1.99
VPS37C-202ENST00000535818 SURF6O75683 361 aaKnown RBP27.47■■□□□ 1.99
VPS37C-202ENST00000535818 CERS5Q8N5B7 392 aa27.47■■□□□ 1.99
VPS37C-202ENST00000535818 ZBTB40Q9NUA8 1239 aa27.47■■□□□ 1.99
VPS37C-202ENST00000535818 PGAP2Q9UHJ9 254 aa27.47■■□□□ 1.99
VPS37C-202ENST00000535818 F8W031 263 aaPredicted RBP27.46■■□□□ 1.99
VPS37C-202ENST00000535818 MMP14P50281 582 aa27.46■■□□□ 1.99
VPS37C-202ENST00000535818 RRP1P56182 461 aaKnown RBP27.46■■□□□ 1.99
VPS37C-202ENST00000535818 MFSD14BQ5SR56 506 aa27.46■■□□□ 1.99
VPS37C-202ENST00000535818 ARAP2Q8WZ64 1704 aa27.45■■□□□ 1.99
VPS37C-202ENST00000535818 DCPSQ96C86 337 aaKnown RBP27.45■■□□□ 1.98
VPS37C-202ENST00000535818 GNL3LQ9NVN8 582 aaKnown RBP27.45■■□□□ 1.98
VPS37C-202ENST00000535818 A0A1B0GUL7 405 aa27.44■■□□□ 1.98
VPS37C-202ENST00000535818 HTRA3P83110 453 aa27.44■■□□□ 1.98
VPS37C-202ENST00000535818 SCARF1Q14162 830 aa27.44■■□□□ 1.98
VPS37C-202ENST00000535818 NEUROD6Q96NK8 337 aa27.44■■□□□ 1.98
VPS37C-202ENST00000535818 GLIS2Q9BZE0 524 aaPredicted RBP27.44■■□□□ 1.98
VPS37C-202ENST00000535818 GGA3Q9NZ52 723 aa27.44■■□□□ 1.98
VPS37C-202ENST00000535818 MYH13Q9UKX3 1938 aa27.43■■□□□ 1.98
VPS37C-202ENST00000535818 TIMM10P62072 90 aa27.43■■□□□ 1.98
VPS37C-202ENST00000535818 CDC37L1Q7L3B6 337 aa27.43■■□□□ 1.98
VPS37C-202ENST00000535818 RPAP2Q8IXW5 612 aaPredicted RBP27.43■■□□□ 1.98
VPS37C-202ENST00000535818 TBC1D22AQ8WUA7 517 aa27.43■■□□□ 1.98
VPS37C-202ENST00000535818 HMMRO75330 724 aa27.42■■□□□ 1.98
VPS37C-202ENST00000535818 ADORA1P30542 326 aa27.42■■□□□ 1.98
VPS37C-202ENST00000535818 TRAF5O00463 557 aa27.41■■□□□ 1.98
VPS37C-202ENST00000535818 PHKA1P46020 1223 aa27.41■■□□□ 1.98
VPS37C-202ENST00000535818 KRT26Q7Z3Y9 468 aa27.41■■□□□ 1.98
VPS37C-202ENST00000535818 NOP58Q9Y2X3 529 aaKnown RBP27.41■■□□□ 1.98
VPS37C-202ENST00000535818 ASTN2O75129 1339 aaPredicted RBP27.41■■□□□ 1.98
VPS37C-202ENST00000535818 GORABQ5T7V8 394 aa27.4■■□□□ 1.98
VPS37C-202ENST00000535818 ANGEL2Q5VTE6 544 aaKnown RBP27.4■■□□□ 1.98
VPS37C-202ENST00000535818 USP48Q86UV5 1035 aa27.4■■□□□ 1.98
VPS37C-202ENST00000535818 XAGE2Q96GT9 111 aa27.4■■□□□ 1.98
VPS37C-202ENST00000535818 CREBZFQ9NS37 354 aa27.4■■□□□ 1.98
VPS37C-202ENST00000535818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.4■■□□□ 1.98
VPS37C-202ENST00000535818 TMEM88BA6NKF7 163 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 WNT10BO00744 389 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 FMR1Q06787 632 aaKnown RBP eCLIP27.39■■□□□ 1.98
VPS37C-202ENST00000535818 DLGAP5Q15398 846 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 NBPF9Q3BBW0 867 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 CCDC102BQ68D86 513 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 SULF1Q8IWU6 871 aa27.39■■□□□ 1.98
VPS37C-202ENST00000535818 TTF2Q9UNY4 1162 aaKnown RBP27.39■■□□□ 1.98
VPS37C-202ENST00000535818 RBM5P52756 815 aaKnown RBP eCLIP27.38■■□□□ 1.97
VPS37C-202ENST00000535818 EXOC6BQ9Y2D4 811 aa27.38■■□□□ 1.97
VPS37C-202ENST00000535818 SEMA3EO15041 775 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 CFAP100Q494V2 611 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 HSP90AB4PQ58FF6 505 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 WDR66Q8TBY9 1149 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 GPR108Q9NPR9 543 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 DENND2AQ9ULE3 1009 aa27.37■■□□□ 1.97
VPS37C-202ENST00000535818 TRPM7Q96QT4 1865 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 ADM5C9JUS6 153 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 TNNI3KQ59H18 835 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 ERC1Q8IUD2 1116 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 ZNF408Q9H9D4 720 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 FPGT-TNNI3KV9GXZ4 949 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 COL1A1P02452 1464 aaPredicted RBP27.36■■□□□ 1.97
VPS37C-202ENST00000535818 PITPNM2Q9BZ72 1349 aa27.36■■□□□ 1.97
VPS37C-202ENST00000535818 POLR2AP24928 1970 aaKnown RBP27.35■■□□□ 1.97
VPS37C-202ENST00000535818 CELF2O95319 508 aaKnown RBP27.34■■□□□ 1.97
VPS37C-202ENST00000535818 SIRT2Q8IXJ6 389 aa27.34■■□□□ 1.97
VPS37C-202ENST00000535818 MTMR14Q8NCE2 650 aa27.34■■□□□ 1.97
VPS37C-202ENST00000535818 MYO1BO43795 1136 aa27.33■■□□□ 1.97
VPS37C-202ENST00000535818 GRIK5Q16478 980 aa27.33■■□□□ 1.97
VPS37C-202ENST00000535818 ZBED3Q96IU2 234 aaPredicted RBP27.33■■□□□ 1.97
VPS37C-202ENST00000535818 SERPINA10Q9UK55 444 aa27.33■■□□□ 1.97
VPS37C-202ENST00000535818 ABT1Q9ULW3 272 aaKnown RBP27.33■■□□□ 1.97
VPS37C-202ENST00000535818 SUGT1Q9Y2Z0 365 aa27.33■■□□□ 1.97
VPS37C-202ENST00000535818 MAST3O60307 1309 aa27.33■■□□□ 1.97
VPS37C-202ENST00000535818 SPDYE2BA6NHP3 402 aa27.32■■□□□ 1.96
VPS37C-202ENST00000535818 SPDYE6P0CI01 402 aa27.32■■□□□ 1.96
VPS37C-202ENST00000535818 PCDHAC2Q9Y5I4 1007 aa27.32■■□□□ 1.96
VPS37C-202ENST00000535818 APBB1O00213 710 aa27.31■■□□□ 1.96
VPS37C-202ENST00000535818 CRKP46108 304 aa27.31■■□□□ 1.96
VPS37C-202ENST00000535818 RASGRF1Q13972 1273 aa27.31■■□□□ 1.96
VPS37C-202ENST00000535818 DLK2Q6UY11 383 aa27.31■■□□□ 1.96
VPS37C-202ENST00000535818 APOBEC3FQ8IUX4 373 aaKnown RBP27.31■■□□□ 1.96
VPS37C-202ENST00000535818 CCDC158Q5M9N0 1113 aa27.3■■□□□ 1.96
VPS37C-202ENST00000535818 CST9Q5W186 159 aa27.3■■□□□ 1.96
VPS37C-202ENST00000535818 DBNDD2Q9BQY9 259 aa27.3■■□□□ 1.96
VPS37C-202ENST00000535818 SCAF8Q9UPN6 1271 aaKnown RBP27.3■■□□□ 1.96
VPS37C-202ENST00000535818 ECM29Q5VYK3 1845 aa27.3■■□□□ 1.96
VPS37C-202ENST00000535818 ZBTB22O15209 634 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 UQCRFS1P1P0C7P4 283 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 TTC39AQ5SRH9 613 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 ZGPATQ8N5A5 531 aaKnown RBP27.29■■□□□ 1.96
VPS37C-202ENST00000535818 DNAJC5GQ8N7S2 189 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 TEKT1Q969V4 418 aa27.29■■□□□ 1.96
VPS37C-202ENST00000535818 KLRG1Q96E93 195 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms