RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 EYA3Q99504 573 aa11.6□□□□□ -0.55
UBB-204ENST00000535788 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
UBB-204ENST00000535788 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
UBB-204ENST00000535788 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
UBB-204ENST00000535788 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
UBB-204ENST00000535788 XDHP47989 1333 aa11.6□□□□□ -0.55
UBB-204ENST00000535788 A6NJR5 290 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 YDJCA8MPS7 323 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 CSF1RP07333 972 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 IGHMBP2P38935 993 aaKnown RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 FOXO4P98177 505 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBB-204ENST00000535788 KIF23Q02241 960 aaPredicted RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 BSDC1Q9NW68 430 aaPredicted RBP11.59□□□□□ -0.55
UBB-204ENST00000535788 RNF186Q9NXI6 227 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
UBB-204ENST00000535788 MKI67P46013 3256 aaKnown RBP11.58□□□□□ -0.56
UBB-204ENST00000535788 SMARCA5O60264 1052 aaPredicted RBP11.58□□□□□ -0.56
UBB-204ENST00000535788 ECE2O60344 883 aa11.58□□□□□ -0.56
UBB-204ENST00000535788 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
UBB-204ENST00000535788 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
UBB-204ENST00000535788 EPHA10Q5JZY3 1008 aa11.58□□□□□ -0.56
UBB-204ENST00000535788 ZC3H12CQ9C0D7 883 aaKnown RBP11.58□□□□□ -0.56
UBB-204ENST00000535788 MINPP1Q9UNW1 487 aa11.58□□□□□ -0.56
UBB-204ENST00000535788 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 IFIT5Q13325 482 aaKnown RBP11.57□□□□□ -0.56
UBB-204ENST00000535788 TNIP1Q15025 636 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 SAGE1Q9NXZ1 904 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
UBB-204ENST00000535788 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 G3V3G9 751 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 NBPF7P0C2Y1 421 aaPredicted RBP11.56□□□□□ -0.56
UBB-204ENST00000535788 ZNF157P51786 506 aaPredicted RBP11.56□□□□□ -0.56
UBB-204ENST00000535788 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 HDAC9Q9UKV0 1011 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 UTYO14607 1347 aa11.56□□□□□ -0.56
UBB-204ENST00000535788 MED23Q9ULK4 1368 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 A0A1B0GUL6 1792 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 WTIPA6NIX2 430 aaPredicted RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 HMGB1P1B2RPK0 211 aaPredicted RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 PSMD14O00487 310 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 IRF5Q13568 498 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
UBB-204ENST00000535788 NOB1Q9ULX3 412 aaKnown RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
UBB-204ENST00000535788 PSME4Q14997 1843 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
UBB-204ENST00000535788 CHRNDQ07001 517 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 TRPM4Q8TD43 1214 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 ZNF594Q96JF6 807 aaPredicted RBP11.54□□□□□ -0.56
UBB-204ENST00000535788 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 API5Q9BZZ5 524 aaKnown RBP11.54□□□□□ -0.56
UBB-204ENST00000535788 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
UBB-204ENST00000535788 PGAP2Q9UHJ9 254 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 NAP1L2Q9ULW6 460 aaPredicted RBP11.54□□□□□ -0.56
UBB-204ENST00000535788 LEMD3Q9Y2U8 911 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 KIF16BQ96L93 1317 aa11.54□□□□□ -0.56
UBB-204ENST00000535788 KCNJ4P48050 445 aa11.53□□□□□ -0.56
UBB-204ENST00000535788 FXR1P51114 621 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBB-204ENST00000535788 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
UBB-204ENST00000535788 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
UBB-204ENST00000535788 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
UBB-204ENST00000535788 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
UBB-204ENST00000535788 YTHDC1Q96MU7 727 aaKnown RBP11.53□□□□□ -0.56
UBB-204ENST00000535788 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
UBB-204ENST00000535788 CNOT7Q9UIV1 285 aaKnown RBP11.53□□□□□ -0.56
UBB-204ENST00000535788 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.56
UBB-204ENST00000535788 DLL1O00548 723 aa11.52□□□□□ -0.57
UBB-204ENST00000535788 RPS12P25398 132 aaKnown RBP11.52□□□□□ -0.57
UBB-204ENST00000535788 KLRK1P26718 216 aa11.52□□□□□ -0.57
UBB-204ENST00000535788 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
UBB-204ENST00000535788 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
UBB-204ENST00000535788 LDHAL6AQ6ZMR3 332 aa11.52□□□□□ -0.57
UBB-204ENST00000535788 ANKRD44Q8N8A2 993 aa11.52□□□□□ -0.57
UBB-204ENST00000535788 HELBQ8NG08 1087 aaPredicted RBP11.52□□□□□ -0.57
UBB-204ENST00000535788 DPF2Q92785 391 aa11.52□□□□□ -0.57
UBB-204ENST00000535788 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms