RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 VEGFAP15692 232 aaPredicted RBP14.83□□□□□ -0.04
CHD4-203ENST00000535717 RPS12P25398 132 aaKnown RBP14.83□□□□□ -0.04
CHD4-203ENST00000535717 GORABQ5T7V8 394 aa14.83□□□□□ -0.04
CHD4-203ENST00000535717 CLASRPQ8N2M8 674 aaKnown RBP14.83□□□□□ -0.04
CHD4-203ENST00000535717 CERS5Q8N5B7 392 aa14.83□□□□□ -0.04
CHD4-203ENST00000535717 BCL11AQ9H165 835 aa14.83□□□□□ -0.04
CHD4-203ENST00000535717 RWDD1Q9H446 243 aaPredicted RBP14.83□□□□□ -0.04
CHD4-203ENST00000535717 GNL3LQ9NVN8 582 aaKnown RBP14.83□□□□□ -0.04
CHD4-203ENST00000535717 GPRC5DQ9NZD1 345 aa14.83□□□□□ -0.04
CHD4-203ENST00000535717 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
CHD4-203ENST00000535717 SHTN1A0MZ66 631 aa14.82□□□□□ -0.04
CHD4-203ENST00000535717 EPS15P42566 896 aa14.82□□□□□ -0.04
CHD4-203ENST00000535717 CHAF1AQ13111 956 aaPredicted RBP14.82□□□□□ -0.04
CHD4-203ENST00000535717 AGBL3Q8NEM8 1001 aa14.82□□□□□ -0.04
CHD4-203ENST00000535717 DPF2Q92785 391 aa14.82□□□□□ -0.04
CHD4-203ENST00000535717 HACL1Q9UJ83 578 aa14.82□□□□□ -0.04
CHD4-203ENST00000535717 SCN4AP35499 1836 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 IQCA1LA6NCM1 817 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 SEMA3EO15041 775 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 ZBTB22O15209 634 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
CHD4-203ENST00000535717 FKBP1AP62942 108 aaKnown RBP14.81□□□□□ -0.04
CHD4-203ENST00000535717 RASGRF1Q13972 1273 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 GCC1Q96CN9 775 aa14.81□□□□□ -0.04
CHD4-203ENST00000535717 TAF1DQ9H5J8 278 aaPredicted RBP14.81□□□□□ -0.04
CHD4-203ENST00000535717 CNOT7Q9UIV1 285 aaKnown RBP14.81□□□□□ -0.04
CHD4-203ENST00000535717 KIF3CO14782 793 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
CHD4-203ENST00000535717 ARID4AP29374 1257 aaPredicted RBP14.8□□□□□ -0.04
CHD4-203ENST00000535717 EPHX2P34913 555 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 SCARF1Q14162 830 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 MFSD14BQ5SR56 506 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 MICALL2Q8IY33 904 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 DENND2AQ9ULE3 1009 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 MYO3BQ8WXR4 1341 aa14.8□□□□□ -0.04
CHD4-203ENST00000535717 NEFLP07196 543 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 USP17L8P0C7I0 530 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 ZNF280AP59817 542 aaPredicted RBP14.79□□□□□ -0.04
CHD4-203ENST00000535717 GRIK5Q16478 980 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 TTC39AQ5SRH9 613 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 KIAA0825Q8IV33 1275 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 WDR66Q8TBY9 1149 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 ZNF512BQ96KM6 892 aaPredicted RBP14.79□□□□□ -0.04
CHD4-203ENST00000535717 HMG20BQ9P0W2 317 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 MYH13Q9UKX3 1938 aa14.79□□□□□ -0.04
CHD4-203ENST00000535717 PDS5AQ29RF7 1337 aaKnown RBP14.78□□□□□ -0.04
CHD4-203ENST00000535717 H7C1D1 291 aa14.78□□□□□ -0.04
CHD4-203ENST00000535717 MCAMP43121 646 aa14.78□□□□□ -0.04
CHD4-203ENST00000535717 ANKRD45Q5TZF3 282 aa14.78□□□□□ -0.04
CHD4-203ENST00000535717 SPATA5Q8NB90 893 aa14.78□□□□□ -0.04
CHD4-203ENST00000535717 TBC1D22AQ8WUA7 517 aa14.78□□□□□ -0.04
CHD4-203ENST00000535717 ADARB2Q9NS39 739 aaKnown RBP14.78□□□□□ -0.04
CHD4-203ENST00000535717 F8W031 263 aaPredicted RBP14.77□□□□□ -0.05
CHD4-203ENST00000535717 EGFRP00533 1210 aa14.77□□□□□ -0.05
CHD4-203ENST00000535717 SAMD7Q7Z3H4 446 aa14.77□□□□□ -0.05
CHD4-203ENST00000535717 C16orf71Q8IYS4 520 aaPredicted RBP14.77□□□□□ -0.05
CHD4-203ENST00000535717 TRPM4Q8TD43 1214 aa14.77□□□□□ -0.05
CHD4-203ENST00000535717 SNRKQ9NRH2 765 aa14.77□□□□□ -0.05
CHD4-203ENST00000535717 SALL1Q9NSC2 1324 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 POTEJP0CG39 1038 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 TBC1D10BQ4KMP7 808 aaPredicted RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 EAPPQ56P03 285 aaPredicted RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 RBM26Q5T8P6 1007 aaKnown RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 B4GALNT3Q6L9W6 998 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 USP50Q70EL3 339 aaPredicted RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 PNMA8AQ86V59 439 aaPredicted RBP14.76□□□□□ -0.05
CHD4-203ENST00000535717 OGFOD1Q8N543 542 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 AKAP11Q9UKA4 1901 aa14.76□□□□□ -0.05
CHD4-203ENST00000535717 MMP14P50281 582 aa14.75□□□□□ -0.05
CHD4-203ENST00000535717 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
CHD4-203ENST00000535717 MYOZ2Q9NPC6 264 aa14.75□□□□□ -0.05
CHD4-203ENST00000535717 HDAC9Q9UKV0 1011 aa14.75□□□□□ -0.05
CHD4-203ENST00000535717 TTF2Q9UNY4 1162 aaKnown RBP14.75□□□□□ -0.05
CHD4-203ENST00000535717 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
CHD4-203ENST00000535717 CYP2E1P05181 493 aaPredicted RBP14.74□□□□□ -0.05
CHD4-203ENST00000535717 ATP5JP18859 108 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 PRDX5P30044 214 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 ZAP70P43403 619 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 NUCB1Q02818 461 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 TBC1D9Q6ZT07 1266 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 ZBTB47Q9UFB7 747 aaPredicted RBP14.74□□□□□ -0.05
CHD4-203ENST00000535717 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
CHD4-203ENST00000535717 ADAMTSL1Q8N6G6 1762 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 LDHBP07195 334 aaKnown RBP14.73□□□□□ -0.05
CHD4-203ENST00000535717 CHD1LQ86WJ1 897 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 LDHDQ86WU2 507 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 ZGPATQ8N5A5 531 aaKnown RBP14.73□□□□□ -0.05
CHD4-203ENST00000535717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHD4-203ENST00000535717 LNPKQ9C0E8 428 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 ECHDC1Q9NTX5 307 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 ABCF2Q9UG63 623 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 PCDHAC2Q9Y5I4 1007 aa14.73□□□□□ -0.05
CHD4-203ENST00000535717 SALL3Q9BXA9 1300 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms