RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 UBE4AQ14139 1066 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 SCARF1Q14162 830 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 STRIP1Q5VSL9 837 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 PRAMEF18Q5VWM3 479 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 AGBL3Q8NEM8 1001 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 FBXW7Q969H0 707 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 ZIC5Q96T25 663 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 C1orf115Q9H7X2 142 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 MYOZ2Q9NPC6 264 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 GGA3Q9NZ52 723 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 SIPA1L1O43166 1804 aa6.36□□□□□ -1.39
USH1C-210ENST00000534556 PTPRFP10586 1907 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 MROH5Q6ZUA9 1318 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 PHIPQ8WWQ0 1821 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 ATAD5Q96QE3 1844 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 RASSF10A6NK89 507 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 G3V3G9 751 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 WNT10BO00744 389 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 ZBTB7BO15156 539 aaPredicted RBP6.35□□□□□ -1.39
USH1C-210ENST00000534556 USP17L8P0C7I0 530 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 TAF7LQ5H9L4 462 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 METTL24Q5JXM2 366 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 DCAF8Q5TAQ9 597 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 C20orf194Q5TEA3 1177 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 ANGEL2Q5VTE6 544 aaKnown RBP6.35□□□□□ -1.39
USH1C-210ENST00000534556 ZKSCAN2Q63HK3 967 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 MOB2Q70IA6 237 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 ZC3H15Q8WU90 426 aaKnown RBP6.35□□□□□ -1.39
USH1C-210ENST00000534556 COPRSQ9NQ92 184 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 FZD1Q9UP38 647 aa6.35□□□□□ -1.39
USH1C-210ENST00000534556 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
USH1C-210ENST00000534556 AOC2O75106 756 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 CELF2O95319 508 aaKnown RBP6.34□□□□□ -1.39
USH1C-210ENST00000534556 HIBADHP31937 336 aaKnown RBP6.34□□□□□ -1.39
USH1C-210ENST00000534556 PHKA1P46020 1223 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 KCNJ4P48050 445 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 TIMM10P62072 90 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 POLA2Q14181 598 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 CYP4F22Q6NT55 531 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 KRT26Q7Z3Y9 468 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 SAPCD2Q86UD0 394 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 CDAN1Q8IWY9 1227 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 PRMT6Q96LA8 375 aaPredicted RBP6.34□□□□□ -1.39
USH1C-210ENST00000534556 TLL2Q9Y6L7 1015 aa6.34□□□□□ -1.39
USH1C-210ENST00000534556 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.4
USH1C-210ENST00000534556 MYH1P12882 1939 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 FAM155AB1AL88 458 aaPredicted RBP6.33□□□□□ -1.4
USH1C-210ENST00000534556 IPO8O15397 1037 aaKnown RBP6.33□□□□□ -1.4
USH1C-210ENST00000534556 SRGAP3O43295 1099 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 CIAO1O76071 339 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 GNAI3P08754 354 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 HSPA1AP0DMV8 641 aaKnown RBP6.33□□□□□ -1.4
USH1C-210ENST00000534556 HSPA1BP0DMV9 641 aaKnown RBP6.33□□□□□ -1.4
USH1C-210ENST00000534556 TFCP2Q12800 502 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 DEFB115Q30KQ5 88 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 CDC37L1Q7L3B6 337 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 ZNF804AQ7Z570 1209 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 SIRT2Q8IXJ6 389 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 DZIP1LQ8IYY4 767 aaKnown RBP6.33□□□□□ -1.4
USH1C-210ENST00000534556 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 SSH3Q8TE77 659 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 ZNF384Q8TF68 577 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 CDCA5Q96FF9 252 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 ZSWIM8A7E2V4 1837 aa6.33□□□□□ -1.4
USH1C-210ENST00000534556 MYO3BQ8WXR4 1341 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 WDR33Q9C0J8 1336 aaKnown RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 CLRN2A0PK11 232 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 SPDYE2BA6NHP3 402 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 FOXN1O15353 648 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 GNAI2P04899 355 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 SPDYE6P0CI01 402 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 FKBP1AP62942 108 aaKnown RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 ATP8B2P98198 1209 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 PUM3Q15397 648 aaKnown RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 ATP2B3Q16720 1220 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 CFAP100Q494V2 611 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 MFSD14BQ5SR56 506 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 COL13A1Q5TAT6 717 aaPredicted RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 PI16Q6UXB8 463 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 CAPNS2Q96L46 248 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 COG6Q9Y2V7 657 aa6.32□□□□□ -1.4
USH1C-210ENST00000534556 BAZ2AQ9UIF9 1905 aaKnown RBP6.32□□□□□ -1.4
USH1C-210ENST00000534556 A0A1B0GUL7 405 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 SLURP2P0DP57 97 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 PRDX5P30044 214 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 IL15P40933 162 aaPredicted RBP6.31□□□□□ -1.4
USH1C-210ENST00000534556 CACNB3P54284 484 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 CEP85Q6P2H3 762 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 ITPRIPQ8IWB1 547 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 LPIN2Q92539 896 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 DCPSQ96C86 337 aaKnown RBP6.31□□□□□ -1.4
USH1C-210ENST00000534556 XAGE2Q96GT9 111 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 TEPSINQ96N21 525 aa6.31□□□□□ -1.4
USH1C-210ENST00000534556 TDRD3Q9H7E2 651 aaKnown RBP6.31□□□□□ -1.4
USH1C-210ENST00000534556 GBA2Q9HCG7 927 aaPredicted RBP6.31□□□□□ -1.4
USH1C-210ENST00000534556 WBP1LQ9NX94 342 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms