RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 HDAC1Q13547 482 aaPredicted RBP29.74■■■□□ 2.35
SIPA1-210ENST00000534406 TAF1DQ9H5J8 278 aaPredicted RBP29.74■■■□□ 2.35
SIPA1-210ENST00000534406 JAG2Q9Y219 1238 aa29.74■■■□□ 2.35
SIPA1-210ENST00000534406 COL1A1P02452 1464 aaPredicted RBP29.74■■■□□ 2.35
SIPA1-210ENST00000534406 CHAF1AQ13111 956 aaPredicted RBP29.73■■■□□ 2.35
SIPA1-210ENST00000534406 AACSQ86V21 672 aa29.73■■■□□ 2.35
SIPA1-210ENST00000534406 MICALL2Q8IY33 904 aa29.73■■■□□ 2.35
SIPA1-210ENST00000534406 CLASRPQ8N2M8 674 aaKnown RBP29.73■■■□□ 2.35
SIPA1-210ENST00000534406 EAF2Q96CJ1 260 aaPredicted RBP29.73■■■□□ 2.35
SIPA1-210ENST00000534406 GMLQ99445 158 aa29.73■■■□□ 2.35
SIPA1-210ENST00000534406 MXD3Q9BW11 206 aa29.73■■■□□ 2.35
SIPA1-210ENST00000534406 SEMA3EO15041 775 aa29.72■■■□□ 2.35
SIPA1-210ENST00000534406 EPHX2P34913 555 aa29.72■■■□□ 2.35
SIPA1-210ENST00000534406 EPS15P42566 896 aa29.72■■■□□ 2.35
SIPA1-210ENST00000534406 FKBP1AP62942 108 aaKnown RBP29.72■■■□□ 2.35
SIPA1-210ENST00000534406 DBNDD2Q9BQY9 259 aa29.72■■■□□ 2.35
SIPA1-210ENST00000534406 LRRCC1Q9C099 1032 aa29.72■■■□□ 2.35
SIPA1-210ENST00000534406 CNOT7Q9UIV1 285 aaKnown RBP29.72■■■□□ 2.35
SIPA1-210ENST00000534406 C16orf71Q8IYS4 520 aaPredicted RBP29.71■■■□□ 2.35
SIPA1-210ENST00000534406 DBNLQ9UJU6 430 aaKnown RBP29.71■■■□□ 2.35
SIPA1-210ENST00000534406 H7C1D1 291 aa29.7■■■□□ 2.35
SIPA1-210ENST00000534406 ZBTB22O15209 634 aa29.7■■■□□ 2.35
SIPA1-210ENST00000534406 TBC1D22AQ8WUA7 517 aa29.7■■■□□ 2.35
SIPA1-210ENST00000534406 ADARB2Q9NS39 739 aaKnown RBP29.7■■■□□ 2.35
SIPA1-210ENST00000534406 TLR7Q9NYK1 1049 aaKnown RBP29.7■■■□□ 2.35
SIPA1-210ENST00000534406 DENND2AQ9ULE3 1009 aa29.7■■■□□ 2.35
SIPA1-210ENST00000534406 SHTN1A0MZ66 631 aa29.69■■■□□ 2.34
SIPA1-210ENST00000534406 MFSD14BQ5SR56 506 aa29.69■■■□□ 2.34
SIPA1-210ENST00000534406 CERS5Q8N5B7 392 aa29.69■■■□□ 2.34
SIPA1-210ENST00000534406 CCDC8Q9H0W5 538 aaPredicted RBP29.69■■■□□ 2.34
SIPA1-210ENST00000534406 USP17L8P0C7I0 530 aa29.68■■■□□ 2.34
SIPA1-210ENST00000534406 ARID4AP29374 1257 aaPredicted RBP29.68■■■□□ 2.34
SIPA1-210ENST00000534406 RASGRF1Q13972 1273 aa29.68■■■□□ 2.34
SIPA1-210ENST00000534406 CCDC158Q5M9N0 1113 aa29.68■■■□□ 2.34
SIPA1-210ENST00000534406 PNMA8AQ86V59 439 aaPredicted RBP29.68■■■□□ 2.34
SIPA1-210ENST00000534406 RWDD1Q9H446 243 aaPredicted RBP29.68■■■□□ 2.34
SIPA1-210ENST00000534406 UQCRFS1P1P0C7P4 283 aa29.67■■■□□ 2.34
SIPA1-210ENST00000534406 TTC39AQ5SRH9 613 aa29.67■■■□□ 2.34
SIPA1-210ENST00000534406 KIAA0825Q8IV33 1275 aa29.67■■■□□ 2.34
SIPA1-210ENST00000534406 WDR66Q8TBY9 1149 aa29.67■■■□□ 2.34
SIPA1-210ENST00000534406 PDS5AQ29RF7 1337 aaKnown RBP29.67■■■□□ 2.34
SIPA1-210ENST00000534406 IFIT2P09913 472 aaKnown RBP29.66■■■□□ 2.34
SIPA1-210ENST00000534406 ZNF280AP59817 542 aaPredicted RBP29.66■■■□□ 2.34
SIPA1-210ENST00000534406 EAPPQ56P03 285 aaPredicted RBP29.66■■■□□ 2.34
SIPA1-210ENST00000534406 GCC1Q96CN9 775 aa29.66■■■□□ 2.34
SIPA1-210ENST00000534406 BCL11AQ9H165 835 aa29.66■■■□□ 2.34
SIPA1-210ENST00000534406 ADAMTSL1Q8N6G6 1762 aa29.66■■■□□ 2.34
SIPA1-210ENST00000534406 SMARCA5O60264 1052 aaPredicted RBP29.65■■■□□ 2.34
SIPA1-210ENST00000534406 USP50Q70EL3 339 aaPredicted RBP29.65■■■□□ 2.34
SIPA1-210ENST00000534406 OGFOD1Q8N543 542 aa29.65■■■□□ 2.34
SIPA1-210ENST00000534406 HDAC9Q9UKV0 1011 aa29.65■■■□□ 2.34
SIPA1-210ENST00000534406 MMP14P50281 582 aa29.64■■■□□ 2.34
SIPA1-210ENST00000534406 TRPM4Q8TD43 1214 aa29.64■■■□□ 2.34
SIPA1-210ENST00000534406 NEFLP07196 543 aa29.63■■■□□ 2.33
SIPA1-210ENST00000534406 F8W031 263 aaPredicted RBP29.62■■■□□ 2.33
SIPA1-210ENST00000534406 TOMM70O94826 608 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 KIF4BQ2VIQ3 1234 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 TBC1D10BQ4KMP7 808 aaPredicted RBP29.62■■■□□ 2.33
SIPA1-210ENST00000534406 SAMD7Q7Z3H4 446 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 LDHDQ86WU2 507 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 ZNF512BQ96KM6 892 aaPredicted RBP29.62■■■□□ 2.33
SIPA1-210ENST00000534406 SUGT1Q9Y2Z0 365 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 AKAP11Q9UKA4 1901 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 SALL1Q9NSC2 1324 aa29.62■■■□□ 2.33
SIPA1-210ENST00000534406 MCAMP43121 646 aa29.61■■■□□ 2.33
SIPA1-210ENST00000534406 SCARF1Q14162 830 aa29.61■■■□□ 2.33
SIPA1-210ENST00000534406 SPATA5Q8NB90 893 aa29.61■■■□□ 2.33
SIPA1-210ENST00000534406 MYOZ2Q9NPC6 264 aa29.61■■■□□ 2.33
SIPA1-210ENST00000534406 HMG20BQ9P0W2 317 aa29.61■■■□□ 2.33
SIPA1-210ENST00000534406 ZBTB47Q9UFB7 747 aaPredicted RBP29.61■■■□□ 2.33
SIPA1-210ENST00000534406 POTEIP0CG38 1075 aa29.6■■■□□ 2.33
SIPA1-210ENST00000534406 POTEJP0CG39 1038 aa29.6■■■□□ 2.33
SIPA1-210ENST00000534406 ZGPATQ8N5A5 531 aaKnown RBP29.6■■■□□ 2.33
SIPA1-210ENST00000534406 RBM46Q8TBY0 533 aaKnown RBP29.6■■■□□ 2.33
SIPA1-210ENST00000534406 TTF2Q9UNY4 1162 aaKnown RBP29.6■■■□□ 2.33
SIPA1-210ENST00000534406 EGFRP00533 1210 aa29.59■■■□□ 2.33
SIPA1-210ENST00000534406 IGHDP01880 384 aa29.59■■■□□ 2.33
SIPA1-210ENST00000534406 RBM26Q5T8P6 1007 aaKnown RBP29.59■■■□□ 2.33
SIPA1-210ENST00000534406 PI16Q6UXB8 463 aa29.59■■■□□ 2.33
SIPA1-210ENST00000534406 MAST3O60307 1309 aa29.58■■■□□ 2.33
SIPA1-210ENST00000534406 SMC5Q8IY18 1101 aa29.58■■■□□ 2.33
SIPA1-210ENST00000534406 CLEC11AQ9Y240 323 aa29.58■■■□□ 2.33
SIPA1-210ENST00000534406 GRIK5Q16478 980 aa29.57■■■□□ 2.32
SIPA1-210ENST00000534406 SMC1BQ8NDV3 1235 aa29.57■■■□□ 2.32
SIPA1-210ENST00000534406 HIRAP54198 1017 aaPredicted RBP29.56■■■□□ 2.32
SIPA1-210ENST00000534406 ANKRD45Q5TZF3 282 aa29.56■■■□□ 2.32
SIPA1-210ENST00000534406 LDHBP07195 334 aaKnown RBP29.55■■■□□ 2.32
SIPA1-210ENST00000534406 PRDX5P30044 214 aa29.55■■■□□ 2.32
SIPA1-210ENST00000534406 CHADLQ6NUI6 762 aa29.55■■■□□ 2.32
SIPA1-210ENST00000534406 SNRKQ9NRH2 765 aa29.55■■■□□ 2.32
SIPA1-210ENST00000534406 SPTY2D1Q68D10 685 aaPredicted RBP29.54■■■□□ 2.32
SIPA1-210ENST00000534406 ZC3H15Q8WU90 426 aaKnown RBP29.54■■■□□ 2.32
SIPA1-210ENST00000534406 GPATCH3Q96I76 525 aa29.54■■■□□ 2.32
SIPA1-210ENST00000534406 ABCF2Q9UG63 623 aa29.54■■■□□ 2.32
SIPA1-210ENST00000534406 SERPINA10Q9UK55 444 aa29.54■■■□□ 2.32
SIPA1-210ENST00000534406 ECM29Q5VYK3 1845 aa29.54■■■□□ 2.32
SIPA1-210ENST00000534406 MAST2Q6P0Q8 1798 aa29.54■■■□□ 2.32
SIPA1-210ENST00000534406 DLGAP5Q15398 846 aa29.53■■■□□ 2.32
SIPA1-210ENST00000534406 CFAP100Q494V2 611 aa29.53■■■□□ 2.32
SIPA1-210ENST00000534406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms