RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 FBXW7Q969H0 707 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 API5Q9BZZ5 524 aaKnown RBP17.67■□□□□ 0.42
SF3B2-215ENST00000534307 WNT10BO00744 389 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 OGFOD1Q8N543 542 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
SF3B2-215ENST00000534307 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
SF3B2-215ENST00000534307 RFX5P48382 616 aaPredicted RBP17.65■□□□□ 0.42
SF3B2-215ENST00000534307 SOX10P56693 466 aa17.65■□□□□ 0.42
SF3B2-215ENST00000534307 FKBP1AP62942 108 aaKnown RBP17.65■□□□□ 0.42
SF3B2-215ENST00000534307 KIAA0825Q8IV33 1275 aa17.65■□□□□ 0.42
SF3B2-215ENST00000534307 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
SF3B2-215ENST00000534307 CDCA5Q96FF9 252 aa17.65■□□□□ 0.42
SF3B2-215ENST00000534307 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
SF3B2-215ENST00000534307 NOGQ13253 232 aa17.64■□□□□ 0.41
SF3B2-215ENST00000534307 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
SF3B2-215ENST00000534307 FAM84BQ96KN1 310 aaPredicted RBP17.64■□□□□ 0.41
SF3B2-215ENST00000534307 GBA2Q9HCG7 927 aaPredicted RBP17.64■□□□□ 0.41
SF3B2-215ENST00000534307 FAM205AQ6ZU69 1335 aa17.64■□□□□ 0.41
SF3B2-215ENST00000534307 HTTP42858 3142 aa17.64■□□□□ 0.41
SF3B2-215ENST00000534307 CENPFP49454 3210 aa17.64■□□□□ 0.41
SF3B2-215ENST00000534307 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
SF3B2-215ENST00000534307 SASH1O94885 1247 aa17.63■□□□□ 0.41
SF3B2-215ENST00000534307 PAPPA2Q9BXP8 1791 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 PDE8BO95263 885 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 UBTFL1P0CB47 393 aaPredicted RBP17.62■□□□□ 0.41
SF3B2-215ENST00000534307 GYG1P46976 350 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 HUNKP57058 714 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 HNRNPUQ00839 825 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF3B2-215ENST00000534307 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
SF3B2-215ENST00000534307 METTL24Q5JXM2 366 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
SF3B2-215ENST00000534307 MTMR14Q8NCE2 650 aa17.62■□□□□ 0.41
SF3B2-215ENST00000534307 SCAF8Q9UPN6 1271 aaKnown RBP17.62■□□□□ 0.41
SF3B2-215ENST00000534307 ECM29Q5VYK3 1845 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 BRCA2P51587 3418 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 HIBADHP31937 336 aaKnown RBP17.61■□□□□ 0.41
SF3B2-215ENST00000534307 PRPF38BQ5VTL8 546 aaKnown RBP17.61■□□□□ 0.41
SF3B2-215ENST00000534307 FBXO33Q7Z6M2 555 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 C2orf69Q8N8R5 385 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 MEIS3Q99687 375 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
SF3B2-215ENST00000534307 FAM155AB1AL88 458 aaPredicted RBP17.6■□□□□ 0.41
SF3B2-215ENST00000534307 BCAR3O75815 825 aa17.6■□□□□ 0.41
SF3B2-215ENST00000534307 TRIM27P14373 513 aa17.6■□□□□ 0.41
SF3B2-215ENST00000534307 FGFR2P21802 821 aa17.6■□□□□ 0.41
SF3B2-215ENST00000534307 SAGE1Q9NXZ1 904 aa17.6■□□□□ 0.41
SF3B2-215ENST00000534307 JAG2Q9Y219 1238 aa17.6■□□□□ 0.41
SF3B2-215ENST00000534307 EYA2O00167 538 aa17.59■□□□□ 0.41
SF3B2-215ENST00000534307 RGMBQ6NW40 437 aa17.59■□□□□ 0.41
SF3B2-215ENST00000534307 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
SF3B2-215ENST00000534307 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
SF3B2-215ENST00000534307 FKBP1BP68106 108 aa17.58■□□□□ 0.4
SF3B2-215ENST00000534307 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
SF3B2-215ENST00000534307 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
SF3B2-215ENST00000534307 PCDHAC2Q9Y5I4 1007 aa17.58■□□□□ 0.4
SF3B2-215ENST00000534307 COL1A1P02452 1464 aaPredicted RBP17.57■□□□□ 0.4
SF3B2-215ENST00000534307 SPDYE2BA6NHP3 402 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
SF3B2-215ENST00000534307 CIAO1O76071 339 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 SPDYE6P0CI01 402 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
SF3B2-215ENST00000534307 DLGAP5Q15398 846 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 MFSD14BQ5SR56 506 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 PRAMEF18Q5VWM3 479 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 APOBEC3FQ8IUX4 373 aaKnown RBP17.57■□□□□ 0.4
SF3B2-215ENST00000534307 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
SF3B2-215ENST00000534307 AOX1Q06278 1338 aa17.56■□□□□ 0.4
SF3B2-215ENST00000534307 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
SF3B2-215ENST00000534307 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-215ENST00000534307 CFAP100Q494V2 611 aa17.56■□□□□ 0.4
SF3B2-215ENST00000534307 PRMT6Q96LA8 375 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-215ENST00000534307 GNAI3P08754 354 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 SLC10A3P09131 477 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 BCAMP50895 628 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 MTX1Q13505 466 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 CAVIN4Q5BKX8 364 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 CCDC102AQ96A19 550 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 RNF186Q9NXI6 227 aa17.55■□□□□ 0.4
SF3B2-215ENST00000534307 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
SF3B2-215ENST00000534307 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
SF3B2-215ENST00000534307 GRIK5Q16478 980 aa17.54■□□□□ 0.4
SF3B2-215ENST00000534307 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
SF3B2-215ENST00000534307 LPIN2Q92539 896 aa17.54■□□□□ 0.4
SF3B2-215ENST00000534307 FRAT1Q92837 279 aaPredicted RBP17.54■□□□□ 0.4
SF3B2-215ENST00000534307 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
SF3B2-215ENST00000534307 IQSEC3Q9UPP2 1182 aaPredicted RBP17.54■□□□□ 0.4
SF3B2-215ENST00000534307 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 TRPA1O75762 1119 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
SF3B2-215ENST00000534307 RASAL3Q86YV0 1011 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 SIL1Q9H173 461 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
SF3B2-215ENST00000534307 TTF2Q9UNY4 1162 aaKnown RBP17.53■□□□□ 0.4
SF3B2-215ENST00000534307 PA2G4Q9UQ80 394 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms