RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
ATM-223ENST00000533979 LATS2Q9NRM7 1088 aa8.11□□□□□ -1.11
ATM-223ENST00000533979 IKBKEQ14164 716 aa8.1□□□□□ -1.11
ATM-223ENST00000533979 CCNJLQ8IV13 435 aa8.1□□□□□ -1.11
ATM-223ENST00000533979 ASAP3Q8TDY4 903 aa8.1□□□□□ -1.11
ATM-223ENST00000533979 ALKBH8Q96BT7 664 aaKnown RBP8.1□□□□□ -1.11
ATM-223ENST00000533979 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
ATM-223ENST00000533979 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
ATM-223ENST00000533979 SOX17Q9H6I2 414 aaPredicted RBP8.1□□□□□ -1.11
ATM-223ENST00000533979 MEGF11A6BM72 1044 aa8.09□□□□□ -1.11
ATM-223ENST00000533979 DDX3YO15523 660 aaKnown RBP8.09□□□□□ -1.11
ATM-223ENST00000533979 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
ATM-223ENST00000533979 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
ATM-223ENST00000533979 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
ATM-223ENST00000533979 CEP41Q9BYV8 373 aa8.09□□□□□ -1.11
ATM-223ENST00000533979 A0A096LPE4 126 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 A0A1W2PPZ6 126 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 ADAM11O75078 769 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 WISP1O95388 367 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 KCNA1Q09470 495 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 PRR23CQ6ZRP0 262 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
ATM-223ENST00000533979 SLC7A3Q8WY07 619 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 UBL7Q96S82 380 aaPredicted RBP8.08□□□□□ -1.12
ATM-223ENST00000533979 TCF12Q99081 682 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 LIN7BQ9HAP6 207 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
ATM-223ENST00000533979 DCTN4Q9UJW0 460 aa8.08□□□□□ -1.12
ATM-223ENST00000533979 EIF1AYO14602 144 aaKnown RBP8.07□□□□□ -1.12
ATM-223ENST00000533979 ESRRAP11474 423 aaPredicted RBP8.07□□□□□ -1.12
ATM-223ENST00000533979 GLB1P16278 677 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 PLCB3Q01970 1234 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 ORC1Q13415 861 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 ACAD11Q709F0 780 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 NPM2Q86SE8 214 aaKnown RBP8.07□□□□□ -1.12
ATM-223ENST00000533979 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
ATM-223ENST00000533979 CCDC74AQ96AQ1 378 aa8.07□□□□□ -1.12
ATM-223ENST00000533979 GPR182O15218 404 aa8.06□□□□□ -1.12
ATM-223ENST00000533979 CSRNP1Q96S65 589 aa8.06□□□□□ -1.12
ATM-223ENST00000533979 GRIA4P48058 902 aa8.05□□□□□ -1.12
ATM-223ENST00000533979 SPRED3Q2MJR0 410 aa8.05□□□□□ -1.12
ATM-223ENST00000533979 RNF208Q9H0X6 261 aa8.05□□□□□ -1.12
ATM-223ENST00000533979 CLEC4MQ9H2X3 399 aaPredicted RBP8.05□□□□□ -1.12
ATM-223ENST00000533979 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
ATM-223ENST00000533979 METTL12A8MUP2 240 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 PATL2C9JE40 543 aaKnown RBP8.04□□□□□ -1.12
ATM-223ENST00000533979 NLRP12P59046 1061 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
ATM-223ENST00000533979 DSC3Q14574 896 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
ATM-223ENST00000533979 TMC7Q7Z402 723 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 FAM46AQ96IP4 442 aaKnown RBP8.04□□□□□ -1.12
ATM-223ENST00000533979 EHD4Q9H223 541 aa8.04□□□□□ -1.12
ATM-223ENST00000533979 ANKRD34AQ69YU3 496 aa8.03□□□□□ -1.12
ATM-223ENST00000533979 UBASH3BQ8TF42 649 aa8.03□□□□□ -1.12
ATM-223ENST00000533979 RUSC1Q9BVN2 902 aa8.03□□□□□ -1.12
ATM-223ENST00000533979 RAXQ9Y2V3 346 aa8.03□□□□□ -1.12
ATM-223ENST00000533979 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
ATM-223ENST00000533979 ITPKAP23677 461 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 GSTM4Q03013 218 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 PCDH1Q08174 1060 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 ARMC10Q8N2F6 343 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 DDX54Q8TDD1 881 aaKnown RBP8.02□□□□□ -1.13
ATM-223ENST00000533979 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 ZFYVE1Q9HBF4 777 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 NPHS2Q9NP85 383 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 STOML1Q9UBI4 398 aa8.02□□□□□ -1.13
ATM-223ENST00000533979 TREHO43280 583 aa8.01□□□□□ -1.13
ATM-223ENST00000533979 SART1O43290 800 aaKnown RBP8.01□□□□□ -1.13
ATM-223ENST00000533979 MAPK1P28482 360 aa8.01□□□□□ -1.13
ATM-223ENST00000533979 ZSCAN29Q8IWY8 852 aaPredicted RBP8.01□□□□□ -1.13
ATM-223ENST00000533979 SUGCTQ9HAC7 445 aa8.01□□□□□ -1.13
ATM-223ENST00000533979 TRAK1Q9UPV9 953 aa8.01□□□□□ -1.13
ATM-223ENST00000533979 IVNS1ABPQ9Y6Y0 642 aa8.01□□□□□ -1.13
ATM-223ENST00000533979 LOC100289279A0A1B0GTE1 492 aa8□□□□□ -1.13
ATM-223ENST00000533979 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
ATM-223ENST00000533979 GADD45BO75293 160 aaPredicted RBP8□□□□□ -1.13
ATM-223ENST00000533979 CYP11A1P05108 521 aa8□□□□□ -1.13
ATM-223ENST00000533979 RPS26P11Q5JNZ5 115 aaPredicted RBP8□□□□□ -1.13
ATM-223ENST00000533979 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
ATM-223ENST00000533979 PRPF40BQ6NWY9 871 aaKnown RBP8□□□□□ -1.13
ATM-223ENST00000533979 CLEC10AQ8IUN9 316 aa8□□□□□ -1.13
ATM-223ENST00000533979 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
ATM-223ENST00000533979 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
ATM-223ENST00000533979 CYP4F12Q9HCS2 524 aa8□□□□□ -1.13
ATM-223ENST00000533979 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
ATM-223ENST00000533979 C12orf50Q8NA57 414 aaPredicted RBP7.99□□□□□ -1.13
ATM-223ENST00000533979 UTP4Q969X6 686 aaKnown RBP7.99□□□□□ -1.13
ATM-223ENST00000533979 MYRFLQ96LU7 910 aa7.99□□□□□ -1.13
ATM-223ENST00000533979 GSC2O15499 205 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 DLGAP3O95886 979 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 B3GALT4O96024 378 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 FSTP19883 344 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 FDX2Q6P4F2 183 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 Q8N3U1 123 aa7.98□□□□□ -1.13
ATM-223ENST00000533979 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms