RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TCF3P15923 654 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
CASP4-212ENST00000533730 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 C1orf216Q8TAB5 229 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 SMARCC1Q92922 1105 aaPredicted RBP10.05□□□□□ -0.8
CASP4-212ENST00000533730 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
CASP4-212ENST00000533730 MAP3K5Q99683 1374 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 DGAT1O75907 488 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 ABL1P00519 1130 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
CASP4-212ENST00000533730 EZH2Q15910 746 aaKnown RBP10.04□□□□□ -0.8
CASP4-212ENST00000533730 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 TRIM50Q86XT4 487 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 HPS1Q92902 700 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
CASP4-212ENST00000533730 KIAA1024Q9UPX6 916 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 WASF2Q9Y6W5 498 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 BTAF1O14981 1849 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 MAPK8IP3Q9UPT6 1336 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 EP400Q96L91 3159 aa10.04□□□□□ -0.8
CASP4-212ENST00000533730 KAT6BQ8WYB5 2073 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 GNAT3A8MTJ3 354 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 KDM6AO15550 1401 aaPredicted RBP10.03□□□□□ -0.8
CASP4-212ENST00000533730 GIGYF1O75420 1035 aaPredicted RBP10.03□□□□□ -0.8
CASP4-212ENST00000533730 FSHRP23945 695 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 CABP4P57796 275 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 NNTQ13423 1086 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
CASP4-212ENST00000533730 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 ANO2Q9NQ90 1003 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
CASP4-212ENST00000533730 RREB1Q92766 1687 aa10.02□□□□□ -0.8
CASP4-212ENST00000533730 H3BRB1 525 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.81
CASP4-212ENST00000533730 DKK1O94907 266 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 TXNRD1Q16881 649 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 PIGBQ92521 554 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 RTF1Q92541 710 aaKnown RBP10.02□□□□□ -0.81
CASP4-212ENST00000533730 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 TUT1Q9H6E5 874 aaKnown RBP10.02□□□□□ -0.81
CASP4-212ENST00000533730 CXXC1Q9P0U4 656 aaPredicted RBP10.02□□□□□ -0.81
CASP4-212ENST00000533730 NOD1Q9Y239 953 aa10.02□□□□□ -0.81
CASP4-212ENST00000533730 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 ITGB4P16144 1822 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 RNMTO43148 476 aaKnown RBP10.01□□□□□ -0.81
CASP4-212ENST00000533730 OCLNQ16625 522 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 TAS1R3Q7RTX0 852 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 LARGE2Q8N3Y3 721 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 PLEKHF1Q96S99 279 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 MRS2Q9HD23 443 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 MRC1P22897 1456 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 ADAMTS7Q9UKP4 1686 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
CASP4-212ENST00000533730 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
CASP4-212ENST00000533730 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
CASP4-212ENST00000533730 TEFQ10587 303 aa10□□□□□ -0.81
CASP4-212ENST00000533730 NFE2L2Q16236 605 aa10□□□□□ -0.81
CASP4-212ENST00000533730 PKDCCQ504Y2 493 aa10□□□□□ -0.81
CASP4-212ENST00000533730 SIX5Q8N196 739 aa10□□□□□ -0.81
CASP4-212ENST00000533730 RUNDC1Q96C34 613 aa10□□□□□ -0.81
CASP4-212ENST00000533730 SLC52A2Q9HAB3 445 aa10□□□□□ -0.81
CASP4-212ENST00000533730 LY75O60449 1722 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 NUP188Q5SRE5 1749 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 LCE2BO14633 110 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 SEC13P55735 322 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 LMOD3Q0VAK6 560 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 CCDC116Q8IYX3 515 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 CCNL1Q9UK58 526 aaPredicted RBP9.99□□□□□ -0.81
CASP4-212ENST00000533730 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
CASP4-212ENST00000533730 ERVH48-1M5A8F1 160 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 ICMTO60725 284 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
CASP4-212ENST00000533730 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 PPP1R26Q5T8A7 1209 aaPredicted RBP9.98□□□□□ -0.81
CASP4-212ENST00000533730 FBXO33Q7Z6M2 555 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 GLYCTKQ8IVS8 523 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 CRIPAKQ8N1N5 446 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 IL17REQ8NFR9 667 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 CCDC85AQ96PX6 553 aaPredicted RBP9.98□□□□□ -0.81
CASP4-212ENST00000533730 STK32BQ9NY57 414 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 ASAP1Q9ULH1 1129 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
CASP4-212ENST00000533730 LOC102724428A0A0B4J2F2 783 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 LGR5O75473 907 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 TIMP2P16035 220 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 MAPK1P28482 360 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 SIK1P57059 783 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 GTF2IP78347 998 aa9.97□□□□□ -0.81
CASP4-212ENST00000533730 PNISRQ8TF01 805 aaKnown RBP9.97□□□□□ -0.81
CASP4-212ENST00000533730 ATG3Q9NT62 314 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms