RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ITGA6P23229 1130 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 KLRK1P26718 216 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
COPB1-210ENST00000533533 SREBF2Q12772 1141 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
COPB1-210ENST00000533533 GCKRQ14397 625 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 G2E3Q7L622 706 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
COPB1-210ENST00000533533 KIAA0825Q8IV33 1275 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
COPB1-210ENST00000533533 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
COPB1-210ENST00000533533 CSF1RP07333 972 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 CASP7P55210 303 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 GTF2IP78347 998 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 PRKG1Q13976 671 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 CFHR5Q9BXR6 569 aa11.04□□□□□ -0.64
COPB1-210ENST00000533533 ZBTB22O15209 634 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 KCNJ4P48050 445 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 CHRNDQ07001 517 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 FLIIQ13045 1269 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 FKBP5Q13451 457 aaPredicted RBP11.03□□□□□ -0.64
COPB1-210ENST00000533533 PRPF38BQ5VTL8 546 aaKnown RBP11.03□□□□□ -0.64
COPB1-210ENST00000533533 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 CD209Q9NNX6 404 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 ANGEL1Q9UNK9 670 aaKnown RBP11.03□□□□□ -0.64
COPB1-210ENST00000533533 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
COPB1-210ENST00000533533 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
COPB1-210ENST00000533533 FKTNO75072 461 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 FBXO46Q6PJ61 603 aaPredicted RBP11.02□□□□□ -0.65
COPB1-210ENST00000533533 POTEHQ6S545 545 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 LINS1Q8NG48 757 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 DNAAF4Q8WXU2 420 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 DEFB129Q9H1M3 183 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 LAMB1P07942 1786 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 IRS2Q9Y4H2 1338 aa11.02□□□□□ -0.65
COPB1-210ENST00000533533 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 SNAP23O00161 211 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 INHBEP58166 350 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 MAP3K11Q16584 847 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 C15orf52Q6ZUT6 534 aaKnown RBP11.01□□□□□ -0.65
COPB1-210ENST00000533533 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 FZD1Q9UP38 647 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 BRCA2P51587 3418 aa11.01□□□□□ -0.65
COPB1-210ENST00000533533 MANSC4A6NHS7 340 aaPredicted RBP11□□□□□ -0.65
COPB1-210ENST00000533533 PPP1R12BO60237 982 aaPredicted RBP11□□□□□ -0.65
COPB1-210ENST00000533533 TAF5LO75529 589 aa11□□□□□ -0.65
COPB1-210ENST00000533533 IL1R1P14778 569 aa11□□□□□ -0.65
COPB1-210ENST00000533533 HELBQ8NG08 1087 aaPredicted RBP11□□□□□ -0.65
COPB1-210ENST00000533533 PPP2R3BQ9Y5P8 575 aa11□□□□□ -0.65
COPB1-210ENST00000533533 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 UNCXA6NJT0 531 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 MYO1BO43795 1136 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 ZBTB48P10074 688 aaPredicted RBP10.99□□□□□ -0.65
COPB1-210ENST00000533533 FOXO4P98177 505 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 IFIT5Q13325 482 aaKnown RBP10.99□□□□□ -0.65
COPB1-210ENST00000533533 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 CFAP100Q494V2 611 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 ZNF804AQ7Z570 1209 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 CLMNQ96JQ2 1002 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
COPB1-210ENST00000533533 CLRN2A0PK11 232 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 F6X3S4 739 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 F8W031 263 aaPredicted RBP10.98□□□□□ -0.65
COPB1-210ENST00000533533 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
COPB1-210ENST00000533533 FKBP1AP62942 108 aaKnown RBP10.98□□□□□ -0.65
COPB1-210ENST00000533533 TRMT2AQ8IZ69 625 aaKnown RBP10.98□□□□□ -0.65
COPB1-210ENST00000533533 SSH1Q8WYL5 1049 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 WNK4Q96J92 1243 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 PRMT6Q96LA8 375 aaPredicted RBP10.98□□□□□ -0.65
COPB1-210ENST00000533533 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
COPB1-210ENST00000533533 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 ZBED9Q6R2W3 1325 aa10.98□□□□□ -0.65
COPB1-210ENST00000533533 IREB2P48200 963 aaKnown RBP10.97□□□□□ -0.65
COPB1-210ENST00000533533 BEND3Q5T5X7 828 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 NBPF12Q5TAG4 269 aaPredicted RBP10.97□□□□□ -0.65
COPB1-210ENST00000533533 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
COPB1-210ENST00000533533 YTHDC1Q96MU7 727 aaKnown RBP10.97□□□□□ -0.65
COPB1-210ENST00000533533 VEZTQ9HBM0 779 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 JAG2Q9Y219 1238 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 TRIM17Q9Y577 477 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 AOX1Q06278 1338 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
COPB1-210ENST00000533533 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.65
COPB1-210ENST00000533533 RBM5P52756 815 aaKnown RBP eCLIP10.96□□□□□ -0.65
COPB1-210ENST00000533533 CCDC57Q2TAC2 916 aa10.96□□□□□ -0.65
COPB1-210ENST00000533533 EPHA10Q5JZY3 1008 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms