RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 TTC39AQ5SRH9 613 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 DCAF8Q5TAQ9 597 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 CHD1LQ86WJ1 897 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 VPS37DQ86XT2 251 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 CERS5Q8N5B7 392 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 SNRKQ9NRH2 765 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 ZBTB12Q9Y330 459 aaPredicted RBP9.69□□□□□ -0.86
COMMD9-207ENST00000533308 GJA3Q9Y6H8 435 aa9.69□□□□□ -0.86
COMMD9-207ENST00000533308 DACT2Q5SW24 774 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 CIAPIN1Q6FI81 312 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
COMMD9-207ENST00000533308 EDC3Q96F86 508 aaKnown RBP9.68□□□□□ -0.86
COMMD9-207ENST00000533308 HMG20BQ9P0W2 317 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 AK9Q5TCS8 1911 aa9.68□□□□□ -0.86
COMMD9-207ENST00000533308 FAM205AQ6ZU69 1335 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 ZAP70P43403 619 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 EIF6P56537 245 aaKnown RBP9.67□□□□□ -0.86
COMMD9-207ENST00000533308 TBC1D9Q6ZT07 1266 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 CENPQQ7L2Z9 268 aaPredicted RBP9.67□□□□□ -0.86
COMMD9-207ENST00000533308 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
COMMD9-207ENST00000533308 MYH2Q9UKX2 1941 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 SCN4AP35499 1836 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 ECM29Q5VYK3 1845 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 ZC3H4Q9UPT8 1303 aaKnown RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 F8W031 263 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 FRAT2O75474 233 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 CHGBP05060 677 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 VIL1P09327 827 aaKnown RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 MX1P20591 662 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 PRDX5P30044 214 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 GMPSP49915 693 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 SCNN1DP51172 638 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 CCDC158Q5M9N0 1113 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 MFSD14BQ5SR56 506 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 ERICH6BQ5W0A0 696 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 TTLL5Q6EMB2 1281 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 SPATA5Q8NB90 893 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 PI4K2BQ8TCG2 481 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 DNAJC2Q99543 621 aaKnown RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 BOLA2Q9H3K6 86 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 ANTXR1Q9H6X2 564 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 PIH1D3Q9NQM4 214 aaKnown RBP9.66□□□□□ -0.86
COMMD9-207ENST00000533308 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
COMMD9-207ENST00000533308 AOX1Q06278 1338 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 GLTPD2A6NH11 291 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 POTECB2RU33 542 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 EGFRP00533 1210 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.86
COMMD9-207ENST00000533308 UQCRFS1P1P0C7P4 283 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 PDE1AP54750 535 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 KIAA0825Q8IV33 1275 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 GPC2Q8N158 579 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 GMLQ99445 158 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 ECHDC1Q9NTX5 307 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 GNL3LQ9NVN8 582 aaKnown RBP9.65□□□□□ -0.86
COMMD9-207ENST00000533308 DENND2AQ9ULE3 1009 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 CDK5RAP2Q96SN8 1893 aa9.65□□□□□ -0.86
COMMD9-207ENST00000533308 GOLIM4O00461 696 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 SEMA3EO15041 775 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 ATP5JP18859 108 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 SLFNL1Q499Z3 407 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 TRPM4Q8TD43 1214 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
COMMD9-207ENST00000533308 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-207ENST00000533308 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
COMMD9-207ENST00000533308 ASTN2O75129 1339 aaPredicted RBP9.63□□□□□ -0.87
COMMD9-207ENST00000533308 PDS5AQ29RF7 1337 aaKnown RBP9.63□□□□□ -0.87
COMMD9-207ENST00000533308 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 SALL1Q9NSC2 1324 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 GSPT1P15170 499 aaKnown RBP9.63□□□□□ -0.87
COMMD9-207ENST00000533308 YY1P25490 414 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 EPS15P42566 896 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 TNIP1Q15025 636 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
COMMD9-207ENST00000533308 L3MBTL3Q96JM7 780 aaPredicted RBP9.63□□□□□ -0.87
COMMD9-207ENST00000533308 HAUS7Q99871 368 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 STAP2Q9UGK3 403 aa9.63□□□□□ -0.87
COMMD9-207ENST00000533308 ZBTB22O15209 634 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 POTEJP0CG39 1038 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 RGS3P49796 1198 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 SAMD7Q7Z3H4 446 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 WDR66Q8TBY9 1149 aa9.62□□□□□ -0.87
COMMD9-207ENST00000533308 GPATCH3Q96I76 525 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms