RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 GNAI3P08754 354 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 TRIM27P14373 513 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 GYG1P46976 350 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 HUNKP57058 714 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 PTPN12Q05209 780 aaKnown RBP21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 CAVIN4Q5BKX8 364 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 VPS37DQ86XT2 251 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 TDRD7Q8NHU6 1098 aaKnown RBP21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 CDCA5Q96FF9 252 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 MEIS3Q99687 375 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 WBP1LQ9NX94 342 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 THSD7BQ9C0I4 1608 aa21.53■■□□□ 1.04
NCAPD3-210ENST00000533155 MAP2K2P36507 400 aa21.52■■□□□ 1.04
NCAPD3-210ENST00000533155 CERS5Q8N5B7 392 aa21.52■■□□□ 1.04
NCAPD3-210ENST00000533155 VGLL2Q8N8G2 317 aa21.52■■□□□ 1.04
NCAPD3-210ENST00000533155 FBXO3Q9UK99 471 aa21.52■■□□□ 1.04
NCAPD3-210ENST00000533155 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.03
NCAPD3-210ENST00000533155 PUM3Q15397 648 aaKnown RBP21.51■■□□□ 1.03
NCAPD3-210ENST00000533155 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
NCAPD3-210ENST00000533155 IFIT1P09914 478 aaKnown RBP21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 DLGAP5Q15398 846 aa21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 FBXO33Q7Z6M2 555 aa21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 BEGAINQ9BUH8 593 aa21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 JAG2Q9Y219 1238 aa21.5■■□□□ 1.03
NCAPD3-210ENST00000533155 FOXN1O15353 648 aa21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 CTCFP49711 727 aaPredicted RBP21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 FKBP1BP68106 108 aa21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 MFSD14BQ5SR56 506 aa21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 COL13A1Q5TAT6 717 aaPredicted RBP21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 APOBEC3FQ8IUX4 373 aaKnown RBP21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 MTMR14Q8NCE2 650 aa21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 ZBED3Q96IU2 234 aaPredicted RBP21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 TNNQ9UQP3 1299 aa21.49■■□□□ 1.03
NCAPD3-210ENST00000533155 F8W031 263 aaPredicted RBP21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 FRAT2O75474 233 aaPredicted RBP21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 CIAO1O76071 339 aa21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 RGMBQ6NW40 437 aa21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 ATG9AQ7Z3C6 839 aa21.48■■□□□ 1.03
NCAPD3-210ENST00000533155 MYO1BO43795 1136 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 SLC5A1P13866 664 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 FGFR2P21802 821 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 NF2P35240 595 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 NOGQ13253 232 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 LPIN2Q92539 896 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 SIL1Q9H173 461 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 CEP126Q9P2H0 1117 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 ECM29Q5VYK3 1845 aa21.47■■□□□ 1.03
NCAPD3-210ENST00000533155 AOC2O75106 756 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 CFAP100Q494V2 611 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 TBC1D22AQ8WUA7 517 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 CCDC102AQ96A19 550 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 COPRSQ9NQ92 184 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 SCAF8Q9UPN6 1271 aaKnown RBP21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 PAPPA2Q9BXP8 1791 aa21.46■■□□□ 1.03
NCAPD3-210ENST00000533155 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.03
NCAPD3-210ENST00000533155 GNAI2P04899 355 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 IL15P40933 162 aaPredicted RBP21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 BCAMP50895 628 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 TMEM57Q8N5G2 664 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 IQSEC3Q9UPP2 1182 aaPredicted RBP21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 ARAP2Q8WZ64 1704 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 MYH13Q9UKX3 1938 aa21.45■■□□□ 1.02
NCAPD3-210ENST00000533155 SPDYE2BA6NHP3 402 aa21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 SRGAP3O43295 1099 aa21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 SPDYE6P0CI01 402 aa21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 ZNF157P51786 506 aaPredicted RBP21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 RBM5P52756 815 aaKnown RBP eCLIP21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 SERPINA10Q9UK55 444 aa21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 TTF2Q9UNY4 1162 aaKnown RBP21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
NCAPD3-210ENST00000533155 CHAF1AQ13111 956 aaPredicted RBP21.43■■□□□ 1.02
NCAPD3-210ENST00000533155 MTX1Q13505 466 aa21.43■■□□□ 1.02
NCAPD3-210ENST00000533155 PPP2R3BQ9Y5P8 575 aa21.43■■□□□ 1.02
NCAPD3-210ENST00000533155 CA12O43570 354 aa21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 ATP2B3Q16720 1220 aa21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 TNS4Q8IZW8 715 aa21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 PRMT6Q96LA8 375 aaPredicted RBP21.42■■□□□ 1.02
NCAPD3-210ENST00000533155 TTLL12Q14166 644 aaPredicted RBP21.41■■□□□ 1.02
NCAPD3-210ENST00000533155 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
NCAPD3-210ENST00000533155 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
NCAPD3-210ENST00000533155 PCDHAC2Q9Y5I4 1007 aa21.41■■□□□ 1.02
NCAPD3-210ENST00000533155 FAM155AB1AL88 458 aaPredicted RBP21.4■■□□□ 1.02
NCAPD3-210ENST00000533155 SLC10A3P09131 477 aa21.4■■□□□ 1.02
NCAPD3-210ENST00000533155 HSPA8P11142 646 aaKnown RBP21.4■■□□□ 1.02
NCAPD3-210ENST00000533155 LBX1P52954 281 aa21.4■■□□□ 1.02
NCAPD3-210ENST00000533155 SUGT1Q9Y2Z0 365 aa21.4■■□□□ 1.02
NCAPD3-210ENST00000533155 MAST3O60307 1309 aa21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 CLRN2A0PK11 232 aa21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 HDLBPQ00341 1268 aaKnown RBP21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 TNFAIP1Q13829 316 aa21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 GNL3LQ9NVN8 582 aaKnown RBP21.39■■□□□ 1.01
NCAPD3-210ENST00000533155 CRKP46108 304 aa21.38■■□□□ 1.01
NCAPD3-210ENST00000533155 WDR66Q8TBY9 1149 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms