RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
CTSB-227ENST00000533110 BRI3BPQ8WY22 251 aa11.94□□□□□ -0.5
CTSB-227ENST00000533110 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
CTSB-227ENST00000533110 BSDC1Q9NW68 430 aaPredicted RBP11.94□□□□□ -0.5
CTSB-227ENST00000533110 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
CTSB-227ENST00000533110 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
CTSB-227ENST00000533110 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
CTSB-227ENST00000533110 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
CTSB-227ENST00000533110 USP2O75604 605 aaPredicted RBP11.93□□□□□ -0.5
CTSB-227ENST00000533110 KCNJ4P48050 445 aa11.93□□□□□ -0.5
CTSB-227ENST00000533110 CTSWP56202 376 aa11.93□□□□□ -0.5
CTSB-227ENST00000533110 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
CTSB-227ENST00000533110 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
CTSB-227ENST00000533110 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
CTSB-227ENST00000533110 ARHGAP39Q9C0H5 1083 aa11.93□□□□□ -0.5
CTSB-227ENST00000533110 SOX1O00570 391 aaPredicted RBP11.92□□□□□ -0.5
CTSB-227ENST00000533110 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
CTSB-227ENST00000533110 RBM5P52756 815 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTSB-227ENST00000533110 RASA3Q14644 834 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 MTFR1Q15390 333 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
CTSB-227ENST00000533110 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 CSADQ9Y600 493 aa11.92□□□□□ -0.5
CTSB-227ENST00000533110 ZNF646O15015 1829 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 F8W031 263 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 CHL1O00533 1208 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 TLR2O60603 784 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 GJA8P48165 433 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 CFAP100Q494V2 611 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 CCER1Q8TC90 406 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 RAET1EQ8TD07 263 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
CTSB-227ENST00000533110 BIN2Q9UBW5 565 aaPredicted RBP11.91□□□□□ -0.5
CTSB-227ENST00000533110 A0A0C4DFX4 3053 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 COL6A3P12111 3177 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 EVI5O60447 810 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 GJB1P08034 283 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 KLRK1P26718 216 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 HOXD10P28358 340 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 GRK4P32298 578 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
CTSB-227ENST00000533110 UBXN2AP68543 259 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 RNF208Q9H0X6 261 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 GREM2Q9H772 168 aa11.9□□□□□ -0.5
CTSB-227ENST00000533110 CETPP11597 493 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 CCL5P13501 91 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 VGLL4Q14135 290 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 UBE2Q1Q7Z7E8 422 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 CERS5Q8N5B7 392 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 DEFB123Q8N688 67 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 TTLL11Q8NHH1 800 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 TRIM47Q96LD4 638 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
CTSB-227ENST00000533110 RIPOR2Q9Y4F9 1068 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 PCDHAC2Q9Y5I4 1007 aa11.89□□□□□ -0.51
CTSB-227ENST00000533110 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
CTSB-227ENST00000533110 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 HELBQ8NG08 1087 aaPredicted RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 PHAXQ9H814 394 aaKnown RBP11.88□□□□□ -0.51
CTSB-227ENST00000533110 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
CTSB-227ENST00000533110 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
CTSB-227ENST00000533110 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
CTSB-227ENST00000533110 OTOFQ9HC10 1997 aa11.88□□□□□ -0.51
CTSB-227ENST00000533110 MYPNQ86TC9 1320 aa11.87□□□□□ -0.51
CTSB-227ENST00000533110 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
CTSB-227ENST00000533110 PSMC4P43686 418 aa11.87□□□□□ -0.51
CTSB-227ENST00000533110 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
CTSB-227ENST00000533110 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
CTSB-227ENST00000533110 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
CTSB-227ENST00000533110 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
CTSB-227ENST00000533110 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 LAMA3Q16787 3333 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 OSBPP22059 807 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 TNNI2P48788 182 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTSB-227ENST00000533110 AOX1Q06278 1338 aa11.86□□□□□ -0.51
CTSB-227ENST00000533110 FKBP1AP62942 108 aaKnown RBP11.85□□□□□ -0.51
CTSB-227ENST00000533110 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
CTSB-227ENST00000533110 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CTSB-227ENST00000533110 ERO1BQ86YB8 467 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms