RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ZNF444Q8N0Y2 327 aaPredicted RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 ANAPC4Q9UJX5 808 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 RANBP6O60518 1105 aaKnown RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 HLTFQ14527 1009 aaKnown RBP eCLIP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 YIPF3Q9GZM5 350 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PTPRTO14522 1441 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 CTAGE15A4D2H0 777 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 CTAGE8P0CG41 777 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 EVCP57679 992 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 CTAGE6Q86UF2 777 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 CTAGE4Q8IX94 777 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 RAB3IL1Q8TBN0 382 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 ZC4H2Q9NQZ6 224 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 TACC1O75410 805 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 RHOXF2BP0C7M4 288 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 SLC4A8Q2Y0W8 1093 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 HOOK3Q86VS8 718 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 RHOXF2Q9BQY4 288 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 GDPD2Q9HCC8 539 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 FAF1Q9UNN5 650 aaPredicted RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 MAGEA9P43362 315 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PDCD2Q16342 344 aaPredicted RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 ATP2B3Q16720 1220 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 CHCHD3Q9NX63 227 aaKnown RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PRDM4Q9UKN5 801 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PIK3C2GO75747 1445 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 MCM10Q7L590 875 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 IFNL2Q8IZJ0 200 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 TMEM94Q12767 1356 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 PPP1R12AO14974 1030 aaPredicted RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 RNF8O76064 485 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 SLC5A1P13866 664 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 GPTP24298 496 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 NUCB1Q02818 461 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 TERF2Q15554 542 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CABS1Q96KC9 395 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 NAPBQ9H115 298 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 RBSNQ9H1K0 784 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 TRIML1Q8N9V2 468 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CCDC150Q8NCX0 1101 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CTCFLQ8NI51 663 aaPredicted RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 SEC62Q99442 399 aaKnown RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 IFIT5Q13325 482 aaKnown RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CCDC40Q4G0X9 1142 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CCDC174Q6PII3 467 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 A2ML1A8K2U0 1454 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 TAF4BQ92750 862 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 STIM2Q9P246 746 aa7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 PUF60Q9UHX1 559 aaKnown RBP7.88□□□□□ -1.15
TGFBR3-210ENST00000533089 CAVIN2O95810 425 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 ATF7IPQ6VMQ6 1270 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 RUFY3Q7L099 469 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 FLT4P35916 1363 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 KRT32Q14532 448 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 FAM43BQ6ZT52 329 aaPredicted RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CWC25Q9NXE8 425 aaPredicted RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 GCC2Q8IWJ2 1684 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 A0A087WUV0 522 aaPredicted RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 GKAP1Q5VSY0 366 aaPredicted RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 TTC19Q6DKK2 380 aaPredicted RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CHD1LQ86WJ1 897 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 EHMT1Q9H9B1 1298 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CAND2O75155 1236 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 IQCA1Q86XH1 822 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 SLF2Q8IX21 1173 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.87□□□□□ -1.151e-6■■■□□ 18.3
TGFBR3-210ENST00000533089 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 MAP3K12Q12852 859 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 SEMA3FQ13275 785 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 DUSP27Q5VZP5 1158 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 GIMAP6Q6P9H5 292 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 WDR75Q8IWA0 830 aaKnown RBP7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 CCDC83Q8IWF9 413 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 VCX3BQ9H321 246 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 BOLA2Q9H3K6 86 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 VCX3AQ9NNX9 186 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 MYOM2P54296 1465 aa7.87□□□□□ -1.15
TGFBR3-210ENST00000533089 PPFIA2O75334 1257 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 DNA2P51530 1060 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 VTI1AQ96AJ9 217 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 TESK2Q96S53 571 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 TSG101Q99816 390 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 ANO10Q9NW15 660 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 EXOC6BQ9Y2D4 811 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 GOLGA6CA6NDK9 693 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 GOLGA6DP0CG33 693 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 RFC4P35249 363 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 CETN2P41208 172 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 PAFAH1B1P43034 410 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 LCA5Q86VQ0 697 aa7.86□□□□□ -1.15
TGFBR3-210ENST00000533089 TEX13AQ9BXU3 409 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms