RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 SMC1BQ8NDV3 1235 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 DACH1Q9UI36 760 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 USP42Q9H9J4 1324 aaKnown RBP11.24□□□□□ -0.61
CDC27-208ENST00000532575 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
CDC27-208ENST00000532575 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
CDC27-208ENST00000532575 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
CDC27-208ENST00000532575 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
CDC27-208ENST00000532575 SRP68Q9UHB9 627 aaKnown RBP11.23□□□□□ -0.61
CDC27-208ENST00000532575 DOLKQ9UPQ8 538 aa11.23□□□□□ -0.61
CDC27-208ENST00000532575 SKIP12755 728 aa11.22□□□□□ -0.61
CDC27-208ENST00000532575 TM4SF1P30408 202 aa11.22□□□□□ -0.61
CDC27-208ENST00000532575 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CDC27-208ENST00000532575 ERVK-9P63128 1117 aa11.22□□□□□ -0.61
CDC27-208ENST00000532575 DDR1Q08345 913 aa11.22□□□□□ -0.61
CDC27-208ENST00000532575 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
CDC27-208ENST00000532575 KIAA1551Q9HCM1 1747 aa11.21□□□□□ -0.61
CDC27-208ENST00000532575 KDM6AO15550 1401 aaPredicted RBP11.21□□□□□ -0.61
CDC27-208ENST00000532575 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.61
CDC27-208ENST00000532575 VEGFAP15692 232 aaPredicted RBP11.21□□□□□ -0.61
CDC27-208ENST00000532575 CHRNA5P30532 468 aa11.21□□□□□ -0.61
CDC27-208ENST00000532575 SCTRP47872 440 aa11.21□□□□□ -0.61
CDC27-208ENST00000532575 Q6ZVU0 165 aa11.21□□□□□ -0.61
CDC27-208ENST00000532575 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
CDC27-208ENST00000532575 KCPQ6ZWJ8 1503 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 BMP1P13497 986 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 LMNB1P20700 586 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 HTRA3P83110 453 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 MAP7D1Q3KQU3 841 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 COL13A1Q5TAT6 717 aaPredicted RBP11.2□□□□□ -0.62
CDC27-208ENST00000532575 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 INTS5Q6P9B9 1019 aaKnown RBP11.2□□□□□ -0.62
CDC27-208ENST00000532575 TBC1D9Q6ZT07 1266 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 PANK3Q9H999 370 aa11.2□□□□□ -0.62
CDC27-208ENST00000532575 GLTPD2A6NH11 291 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 OXLD1Q5BKU9 147 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 TRIM46Q7Z4K8 759 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 TNS4Q8IZW8 715 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
CDC27-208ENST00000532575 SOS1Q07889 1333 aaPredicted RBP11.18□□□□□ -0.62
CDC27-208ENST00000532575 MRPL14Q6P1L8 145 aaKnown RBP11.18□□□□□ -0.62
CDC27-208ENST00000532575 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 DNAJC10Q8IXB1 793 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
CDC27-208ENST00000532575 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
CDC27-208ENST00000532575 ARFGEF1Q9Y6D6 1849 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 H0YIN7 160 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 ATP9BO43861 1147 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 ADH1AP07327 375 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
CDC27-208ENST00000532575 NFIXQ14938 502 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
CDC27-208ENST00000532575 TFIP11Q9UBB9 837 aaKnown RBP11.17□□□□□ -0.62
CDC27-208ENST00000532575 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 SERPINB2P05120 415 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 IL13P35225 146 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 PRELPP51888 382 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 RASSF7Q02833 373 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
CDC27-208ENST00000532575 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
CDC27-208ENST00000532575 A0A087WZG4 1122 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 PALM3A6NDB9 673 aaPredicted RBP11.15□□□□□ -0.62
CDC27-208ENST00000532575 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
CDC27-208ENST00000532575 USP4Q13107 963 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 NCOA4Q13772 614 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 KDF1Q8NAX2 398 aaPredicted RBP11.15□□□□□ -0.62
CDC27-208ENST00000532575 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
CDC27-208ENST00000532575 MYH14Q7Z406 1995 aaKnown RBP11.15□□□□□ -0.62
CDC27-208ENST00000532575 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
CDC27-208ENST00000532575 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
CDC27-208ENST00000532575 STARD3NLO95772 234 aa11.14□□□□□ -0.63
CDC27-208ENST00000532575 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
CDC27-208ENST00000532575 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
CDC27-208ENST00000532575 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
CDC27-208ENST00000532575 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
CDC27-208ENST00000532575 COL15A1P39059 1388 aa11.14□□□□□ -0.63
CDC27-208ENST00000532575 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
CDC27-208ENST00000532575 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
CDC27-208ENST00000532575 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
CDC27-208ENST00000532575 PDE6BP35913 854 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 RELBQ01201 579 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 SLC39A6Q13433 755 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 EML3Q32P44 896 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 C6orf118Q5T5N4 469 aa11.13□□□□□ -0.63
CDC27-208ENST00000532575 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms