RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 SEC62Q99442 399 aaKnown RBP26.53■■□□□ 1.84
PACSIN3-209ENST00000532457 HIBADHP31937 336 aaKnown RBP26.52■■□□□ 1.84
PACSIN3-209ENST00000532457 ARHGAP27Q6ZUM4 889 aa26.52■■□□□ 1.84
PACSIN3-209ENST00000532457 TBC1D16Q8TBP0 767 aa26.52■■□□□ 1.84
PACSIN3-209ENST00000532457 UFL1O94874 794 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 ATP2B4P23634 1241 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 SUPT20HQ8NEM7 779 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 PSMD1Q99460 953 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 ANO2Q9NQ90 1003 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 GGA1Q9UJY5 639 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 MYO5AQ9Y4I1 1855 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 C15orf52Q6ZUT6 534 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 RUFY2Q8WXA3 655 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 KIF2CQ99661 725 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 LSG1Q9H089 658 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 TAOK3Q9H2K8 898 aa26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 COL1A1P02452 1464 aaPredicted RBP26.51■■□□□ 1.83
PACSIN3-209ENST00000532457 RFX7Q2KHR2 1363 aa26.5■■□□□ 1.83
PACSIN3-209ENST00000532457 RNF113AO15541 343 aaKnown RBP26.5■■□□□ 1.83
PACSIN3-209ENST00000532457 ZNF589Q86UQ0 364 aaPredicted RBP26.5■■□□□ 1.83
PACSIN3-209ENST00000532457 VPS37DQ86XT2 251 aa26.5■■□□□ 1.83
PACSIN3-209ENST00000532457 LTBP1Q14766 1721 aa26.5■■□□□ 1.83
PACSIN3-209ENST00000532457 PTH1RQ03431 593 aa26.49■■□□□ 1.83
PACSIN3-209ENST00000532457 SNED1Q8TER0 1413 aa26.49■■□□□ 1.83
PACSIN3-209ENST00000532457 RTFDC1Q9BY42 306 aaPredicted RBP26.49■■□□□ 1.83
PACSIN3-209ENST00000532457 GNL3LQ9NVN8 582 aaKnown RBP26.49■■□□□ 1.83
PACSIN3-209ENST00000532457 LTBP3Q9NS15 1303 aa26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 FER1L6Q2WGJ9 1857 aa26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 C6orf229H3BNL8 230 aa26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 EIF5BO60841 1220 aaKnown RBP26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 ZMYM1Q5SVZ6 1142 aa26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 CCDC129Q6ZRS4 1044 aa26.48■■□□□ 1.83
PACSIN3-209ENST00000532457 TTF1Q15361 905 aaPredicted RBP26.47■■□□□ 1.83
PACSIN3-209ENST00000532457 TICAM2Q86XR7 235 aa26.47■■□□□ 1.83
PACSIN3-209ENST00000532457 EYA3Q99504 573 aa26.47■■□□□ 1.83
PACSIN3-209ENST00000532457 OSBP2Q969R2 916 aa26.46■■□□□ 1.83
PACSIN3-209ENST00000532457 VPS33BQ9H267 617 aa26.46■■□□□ 1.83
PACSIN3-209ENST00000532457 MED23Q9ULK4 1368 aa26.46■■□□□ 1.83
PACSIN3-209ENST00000532457 NFKBIEO00221 500 aa26.46■■□□□ 1.83
PACSIN3-209ENST00000532457 MCMDC2Q4G0Z9 681 aa26.46■■□□□ 1.83
PACSIN3-209ENST00000532457 IDH1O75874 414 aaKnown RBP26.45■■□□□ 1.82
PACSIN3-209ENST00000532457 DENND2AQ9ULE3 1009 aa26.45■■□□□ 1.82
PACSIN3-209ENST00000532457 DUOX1Q9NRD9 1551 aa26.45■■□□□ 1.82
PACSIN3-209ENST00000532457 ANP32AP39687 249 aaKnown RBP26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 SLC9C2Q5TAH2 1124 aa26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 TDRD7Q8NHU6 1098 aaKnown RBP26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 ADD2P35612 726 aa26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 WASHC4Q2M389 1173 aa26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 ZC3H12CQ9C0D7 883 aaKnown RBP26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 HELLSQ9NRZ9 838 aa26.44■■□□□ 1.82
PACSIN3-209ENST00000532457 RAD50Q92878 1312 aa26.43■■□□□ 1.82
PACSIN3-209ENST00000532457 TCRBV5S4A2TA0A5A2 114 aa26.43■■□□□ 1.82
PACSIN3-209ENST00000532457 M0R2C6 588 aa26.43■■□□□ 1.82
PACSIN3-209ENST00000532457 SEMA3EO15041 775 aa26.43■■□□□ 1.82
PACSIN3-209ENST00000532457 JAG2Q9Y219 1238 aa26.43■■□□□ 1.82
PACSIN3-209ENST00000532457 KIAA1211Q6ZU35 1233 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 PUS7LQ9H0K6 701 aaKnown RBP26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 CD209Q9NNX6 404 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 PALD1Q9ULE6 856 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 RIMBP2O15034 1052 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 ZBTB22O15209 634 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 FRAT2O75474 233 aaPredicted RBP26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 ZFYP08048 801 aaPredicted RBP26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 PDE6AP16499 860 aa26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 ZNF277Q9NRM2 450 aaPredicted RBP26.42■■□□□ 1.82
PACSIN3-209ENST00000532457 MAST3O60307 1309 aa26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 LMNB1P20700 586 aa26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 RASSF7Q02833 373 aa26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 CHAF1AQ13111 956 aaPredicted RBP26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 CCDC171Q6TFL3 1326 aa26.41■■□□□ 1.82
PACSIN3-209ENST00000532457 IARSP41252 1262 aaKnown RBP26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 ZNF804AQ7Z570 1209 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 MAP4K1Q92918 833 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 ABCF2Q9UG63 623 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 ZNF532Q9HCE3 1301 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 MYH7P12883 1935 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 DOCK2Q92608 1830 aa26.4■■□□□ 1.82
PACSIN3-209ENST00000532457 PPIP5K2O43314 1243 aa26.39■■□□□ 1.82
PACSIN3-209ENST00000532457 IL1R1P14778 569 aa26.39■■□□□ 1.82
PACSIN3-209ENST00000532457 KIAA2012Q0VF49 1180 aa26.39■■□□□ 1.82
PACSIN3-209ENST00000532457 APPBP2Q92624 585 aa26.39■■□□□ 1.82
PACSIN3-209ENST00000532457 EPB41L2O43491 1005 aaKnown RBP26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 HSPA4P34932 840 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 UBE3CQ15386 1083 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 VPS53Q5VIR6 699 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 MAGEB6Q8N7X4 407 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 ZNF384Q8TF68 577 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 LRP2BPQ9P2M1 347 aa26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 PDS5AQ29RF7 1337 aaKnown RBP26.39■■□□□ 1.81
PACSIN3-209ENST00000532457 MAP3K12Q12852 859 aa26.38■■□□□ 1.81
PACSIN3-209ENST00000532457 LRRFIP1Q32MZ4 808 aaKnown RBP26.38■■□□□ 1.81
PACSIN3-209ENST00000532457 LARGE2Q8N3Y3 721 aa26.38■■□□□ 1.81
PACSIN3-209ENST00000532457 G3V3G9 751 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 AOC3Q16853 763 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 DCAF8Q5TAQ9 597 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 ZSCAN25Q6NSZ9 544 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 JDP2Q8WYK2 163 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 RASEFQ8IZ41 740 aa26.37■■□□□ 1.81
PACSIN3-209ENST00000532457 FOXP2O15409 715 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms