RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MRPL50Q8N5N7 158 aaKnown RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZNF454Q8N9F8 522 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZNF784Q8NCA9 323 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 JARID2Q92833 1246 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 TAOK3Q9H2K8 898 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 SMC4Q9NTJ3 1288 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 RNF181Q9P0P0 153 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 TFIP11Q9UBB9 837 aaKnown RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 TNRC6CQ9HCJ0 1690 aaKnown RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 UTRNP46939 3433 aa7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 COL11A2P13942 1736 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P42-201ENST00000532126 ABCC4O15439 1325 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 DLEC1Q9Y238 1755 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 POTEFA5A3E0 1075 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 PDE8AO60658 829 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 BBOX1O75936 387 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 POTEIP0CG38 1075 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 GRAPQ13588 217 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 ELOAQ14241 798 aaKnown RBP7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 GCKRQ14397 625 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 SF3B3Q15393 1217 aaKnown RBP7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 GRIPAP1Q4V328 841 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 BEND3Q5T5X7 828 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 OLFM4Q6UX06 510 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 UBE3BQ7Z3V4 1068 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 GRAPLQ8TC17 118 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 ALG2Q9H553 416 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 ATP6V0A2Q9Y487 856 aa7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
HMGB1P42-201ENST00000532126 PTPRCP08575 1304 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZBED9Q6R2W3 1325 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 CDHR2Q9BYE9 1310 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 LTBP3Q9NS15 1303 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 H7C1W4 665 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 FKBP4Q02790 459 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 CCDC152Q4G0S7 254 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 ZNF526Q8TF50 670 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 GIPC2Q8TF65 315 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 SRCIN1Q9C0H9 1055 aa7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 GOLGB1Q14789 3259 aaKnown RBP7.28□□□□□ -1.24
HMGB1P42-201ENST00000532126 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 LILRB3O75022 631 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 ALDH1L1O75891 902 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 BRD2P25440 801 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 PRELPP51888 382 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 RARSP54136 660 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 CTSWP56202 376 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 RPS8P62241 208 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 CSPP1Q1MSJ5 1256 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 TMC4Q7Z404 712 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 SP8Q8IXZ3 490 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 CELF1Q92879 486 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 ZNF277Q9NRM2 450 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 C9orf78Q9NZ63 289 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 NOB1Q9ULX3 412 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 MAFBQ9Y5Q3 323 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 SLX4Q8IY92 1834 aa7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.25
HMGB1P42-201ENST00000532126 RCCD1A6NED2 376 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 GRM8O00222 908 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 CD46P15529 392 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 DPP8Q6V1X1 898 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 SLC51AQ86UW1 340 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 SULF1Q8IWU6 871 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 MPNDQ8N594 471 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 TTLL11Q8NHH1 800 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 CDC5LQ99459 802 aaKnown RBP7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 PSMD1Q99460 953 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 ADAM33Q9BZ11 813 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 API5Q9BZZ5 524 aaKnown RBP7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 SEC31BQ9NQW1 1179 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 KDM2BQ8NHM5 1336 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 KIF16BQ96L93 1317 aa7.26□□□□□ -1.25
HMGB1P42-201ENST00000532126 CHD4Q14839 1912 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 IPO8O15397 1037 aaKnown RBP7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 IARSP41252 1262 aaKnown RBP7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 CASP7P55210 303 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 VAC14Q08AM6 782 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 SEMA3FQ13275 785 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 PRPF38BQ5VTL8 546 aaKnown RBP7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 ANKRD18AQ8IVF6 992 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 SUPT20HQ8NEM7 779 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 JDP2Q8WYK2 163 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 PLA2G12BQ9BX93 195 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 GREM2Q9H772 168 aa7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 NSFL1CQ9UNZ2 370 aaKnown RBP7.25□□□□□ -1.25
HMGB1P42-201ENST00000532126 RTL9Q8NET4 1388 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 GLTPD2A6NH11 291 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 MOXD2PA6NHM9 499 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
HMGB1P42-201ENST00000532126 BCAR3O75815 825 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms