RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 PUM3Q15397 648 aaKnown RBP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 SUSD4Q5VX71 490 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 BLOC1S2Q6QNY1 142 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 LPIN2Q92539 896 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 TTC14Q96N46 770 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 CDC5LQ99459 802 aaKnown RBP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 MPHOSPH8Q99549 860 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 UPF3BQ9BZI7 483 aaKnown RBP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 TRPC5Q9UL62 973 aaPredicted RBP9.44□□□□□ -0.9
TRIM44-202ENST00000532066 UBN2Q6ZU65 1347 aa9.44□□□□□ -0.9
TRIM44-202ENST00000532066 KCNQ2O43526 872 aa9.43□□□□□ -0.9
TRIM44-202ENST00000532066 CYP2E1P05181 493 aaPredicted RBP9.43□□□□□ -0.9
TRIM44-202ENST00000532066 SLC5A1P13866 664 aa9.43□□□□□ -0.9
TRIM44-202ENST00000532066 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
TRIM44-202ENST00000532066 ISY1Q9ULR0 285 aaKnown RBP9.43□□□□□ -0.9
TRIM44-202ENST00000532066 RPAP1Q9BWH6 1393 aaPredicted RBP9.42□□□□□ -0.9
TRIM44-202ENST00000532066 WDR33Q9C0J8 1336 aaKnown RBP9.42□□□□□ -0.9
TRIM44-202ENST00000532066 TRAK2O60296 914 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 NTSR2O95665 410 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 AK2P54819 239 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 SLC10A5Q5PT55 438 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 NARFQ9UHQ1 456 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 RTCBQ9Y3I0 505 aaKnown RBP9.42□□□□□ -0.9
TRIM44-202ENST00000532066 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
TRIM44-202ENST00000532066 RIC1Q4ADV7 1423 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 AFF2P51816 1311 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 ZPR1O75312 459 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 BAG4O95429 457 aaKnown RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 SLC34A2O95436 690 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 SF3B3Q15393 1217 aaKnown RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 SYNE4Q8N205 404 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 VGLL2Q8N8G2 317 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 APPBP2Q92624 585 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 EDC3Q96F86 508 aaKnown RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 CCNL1Q9UK58 526 aaPredicted RBP9.41□□□□□ -0.9
TRIM44-202ENST00000532066 SMC3Q9UQE7 1217 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 ATP6V1DQ9Y5K8 247 aa9.41□□□□□ -0.9
TRIM44-202ENST00000532066 ATRNO75882 1429 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 BRD1O95696 1058 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 PDCP20941 246 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 FGFR2P21802 821 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 HSPA1LP34931 641 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 ZNF589Q86UQ0 364 aaPredicted RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 ZGPATQ8N5A5 531 aaKnown RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
TRIM44-202ENST00000532066 GNL3LQ9NVN8 582 aaKnown RBP9.4□□□□□ -0.9
TRIM44-202ENST00000532066 NUP98P52948 1817 aa9.4□□□□□ -0.91
TRIM44-202ENST00000532066 LRP5O75197 1615 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 IGSF3O75054 1194 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 ADORA1P30542 326 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 CSPP1Q1MSJ5 1256 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 PODXL2Q9NZ53 605 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
TRIM44-202ENST00000532066 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
TRIM44-202ENST00000532066 MAST3O60307 1309 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 GNPATO15228 680 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 PBX2P40425 430 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 ZAP70P43403 619 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 LSM11P83369 360 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRIM44-202ENST00000532066 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 IMMTQ16891 758 aaKnown RBP9.38□□□□□ -0.91
TRIM44-202ENST00000532066 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 TMED8Q6PL24 325 aaPredicted RBP9.38□□□□□ -0.91
TRIM44-202ENST00000532066 FAM196AQ6ZSG2 479 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 NOL8Q76FK4 1167 aaKnown RBP9.38□□□□□ -0.91
TRIM44-202ENST00000532066 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 ANKRD2Q9GZV1 360 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 BSDC1Q9NW68 430 aaPredicted RBP9.38□□□□□ -0.91
TRIM44-202ENST00000532066 KIF3AQ9Y496 699 aa9.38□□□□□ -0.91
TRIM44-202ENST00000532066 KAT6BQ8WYB5 2073 aa9.37□□□□□ -0.91
TRIM44-202ENST00000532066 MBD3O95983 291 aa9.37□□□□□ -0.91
TRIM44-202ENST00000532066 NUDT7P0C024 238 aa9.37□□□□□ -0.91
TRIM44-202ENST00000532066 HSPD1P10809 573 aaKnown RBP9.37□□□□□ -0.91
TRIM44-202ENST00000532066 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
TRIM44-202ENST00000532066 RFC4P35249 363 aa9.37□□□□□ -0.91
TRIM44-202ENST00000532066 ADD2P35612 726 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms