RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, human

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-208	ENST00000532056	EPHX2	P34913	555 aa		12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	PHKA1	P46020	1223 aa		12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	EAF2	Q96CJ1	260 aa	Predicted RBP	12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	GML	Q99445	158 aa		12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	IL1RAPL2	Q9NP60	686 aa		12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	COL1A1	P02452	1464 aa	Predicted RBP	12.37	□□□□□ -0.43
KNL1-208	ENST00000532056	ADAMTSL1	Q8N6G6	1762 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	EPS15	P42566	896 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	GORAB	Q5T7V8	394 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	AACS	Q86V21	672 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	MICALL2	Q8IY33	904 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	CLASRP	Q8N2M8	674 aa	Known RBP	12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	CERS5	Q8N5B7	392 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	TBC1D22A	Q8WUA7	517 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	DBNDD2	Q9BQY9	259 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	MXD3	Q9BW11	206 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	LRRCC1	Q9C099	1032 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	ADARB2	Q9NS39	739 aa	Known RBP	12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	CNOT7	Q9UIV1	285 aa	Known RBP	12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	DBNL	Q9UJU6	430 aa	Known RBP	12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	DENND2A	Q9ULE3	1009 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	JAG2	Q9Y219	1238 aa		12.36	□□□□□ -0.43
KNL1-208	ENST00000532056	PDS5A	Q29RF7	1337 aa	Known RBP	12.36	□□□□□ -0.43
KNL1-208	ENST00000532056		H7C1D1	291 aa		12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	USP17L8	P0C7I0	530 aa		12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	ARID4A	P29374	1257 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	MMP14	P50281	582 aa		12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	ZNF280A	P59817	542 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	CHAF1A	Q13111	956 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	CCDC158	Q5M9N0	1113 aa		12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	MFSD14B	Q5SR56	506 aa		12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	USP50	Q70EL3	339 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	PNMA8A	Q86V59	439 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	TLR7	Q9NYK1	1049 aa	Known RBP	12.35	□□□□□ -0.43
KNL1-208	ENST00000532056	SHTN1	A0MZ66	631 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	UQCRFS1P1	P0C7P4	283 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	RASGRF1	Q13972	1273 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	TTC39A	Q5SRH9	613 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	WDR66	Q8TBY9	1149 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	GCC1	Q96CN9	775 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	RWDD1	Q9H446	243 aa	Predicted RBP	12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	SALL1	Q9NSC2	1324 aa		12.34	□□□□□ -0.43
KNL1-208	ENST00000532056	TOMM70	O94826	608 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	IFIT2	P09913	472 aa	Known RBP	12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	KIAA0825	Q8IV33	1275 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	OGFOD1	Q8N543	542 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	TRPM4	Q8TD43	1214 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	HDAC9	Q9UKV0	1011 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	SUGT1	Q9Y2Z0	365 aa		12.33	□□□□□ -0.44
KNL1-208	ENST00000532056	SMARCA5	O60264	1052 aa	Predicted RBP	12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	MCAM	P43121	646 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	EAPP	Q56P03	285 aa	Predicted RBP	12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	SAMD7	Q7Z3H4	446 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	LDHD	Q86WU2	507 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	ZGPAT	Q8N5A5	531 aa	Known RBP	12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	SPATA5	Q8NB90	893 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	RBM46	Q8TBY0	533 aa	Known RBP	12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	MYOZ2	Q9NPC6	264 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	HMG20B	Q9P0W2	317 aa		12.32	□□□□□ -0.44
KNL1-208	ENST00000532056	AKAP11	Q9UKA4	1901 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056		F8W031	263 aa	Predicted RBP	12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	IGHD	P01880	384 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	POTEI	P0CG38	1075 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	POTEJ	P0CG39	1038 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	HIRA	P54198	1017 aa	Predicted RBP	12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	SCARF1	Q14162	830 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	GRIK5	Q16478	980 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	KIF4B	Q2VIQ3	1234 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	SMC5	Q8IY18	1101 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	TTF2	Q9UNY4	1162 aa	Known RBP	12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	MAST3	O60307	1309 aa		12.31	□□□□□ -0.44
KNL1-208	ENST00000532056	EGFR	P00533	1210 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	NEFL	P07196	543 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	RBM26	Q5T8P6	1007 aa	Known RBP	12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	CHADL	Q6NUI6	762 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	PI16	Q6UXB8	463 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	MTMR14	Q8NCE2	650 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	SMC1B	Q8NDV3	1235 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	ZC3H15	Q8WU90	426 aa	Known RBP	12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	ZBED3	Q96IU2	234 aa	Predicted RBP	12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	BCL11A	Q9H165	835 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	PGAP2	Q9UHJ9	254 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	CLEC11A	Q9Y240	323 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	MAST2	Q6P0Q8	1798 aa		12.3	□□□□□ -0.44
KNL1-208	ENST00000532056	LDHB	P07195	334 aa	Known RBP	12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	PRDX5	P30044	214 aa		12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	HDLBP	Q00341	1268 aa	Known RBP	12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	FSTL1	Q12841	308 aa		12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	ANKRD45	Q5TZF3	282 aa		12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	SERPINA10	Q9UK55	444 aa		12.29	□□□□□ -0.44
KNL1-208	ENST00000532056	ECM29	Q5VYK3	1845 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms