RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 MKRN1Q9UHC7 482 aaKnown RBP11.11□□□□□ -0.63
PTP4A2-213ENST00000532001 IL16Q14005 1332 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 SMAPO00193 183 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 TNIP1Q15025 636 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
PTP4A2-213ENST00000532001 ZNF609O15014 1411 aa11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 SCN9AQ15858 1988 aa11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 PCCAP05165 728 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 GMPSP49915 693 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 PTGDRQ13258 359 aa11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 COL13A1Q5TAT6 717 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
PTP4A2-213ENST00000532001 YDJCA8MPS7 323 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 VEGFBP49765 207 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 MYD88Q99836 296 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 CWC25Q9NXE8 425 aaPredicted RBP11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
PTP4A2-213ENST00000532001 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 PDE8AO60658 829 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 GPSM2P81274 684 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 WASHC4Q2M389 1173 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 CCDC152Q4G0S7 254 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 DPF2Q92785 391 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 EYA3Q99504 573 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 SPEF2Q9C093 1822 aa11.07□□□□□ -0.64
PTP4A2-213ENST00000532001 RAD17O75943 681 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 RPS12P25398 132 aaKnown RBP11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 DEFB115Q30KQ5 88 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 TBC1D16Q8TBP0 767 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 TSR2Q969E8 191 aaKnown RBP11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 ZNF428Q96B54 188 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 STK31Q9BXU1 1019 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 NSFL1CQ9UNZ2 370 aaKnown RBP11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 ZNF646O15015 1829 aaPredicted RBP11.06□□□□□ -0.64
PTP4A2-213ENST00000532001 POLR2AP24928 1970 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 IGKV5-2P06315 115 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 TWISTNBQ3B726 338 aaPredicted RBP11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 BCL2L13Q9BXK5 485 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 SEC31BQ9NQW1 1179 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 MAP3K2Q9Y2U5 619 aa11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
PTP4A2-213ENST00000532001 PI4KAP2A4QPH2 592 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 C6orf229H3BNL8 230 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 TRAF5O00463 557 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 PSMD14O00487 310 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 FOXN1O15353 648 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 ECE2O60344 883 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 HIRAP54198 1017 aaPredicted RBP11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 CTSWP56202 376 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 CST9Q5W186 159 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 PI4KAP1Q8N8J0 262 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 TRPM4Q8TD43 1214 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 DBNDD1Q9H9R9 158 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 CNOT7Q9UIV1 285 aaKnown RBP11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 ABT1Q9ULW3 272 aaKnown RBP11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 TLL2Q9Y6L7 1015 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 FANCIQ9NVI1 1328 aa11.04□□□□□ -0.64
PTP4A2-213ENST00000532001 H7C1D1 291 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 UFL1O94874 794 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 ECE1P42892 770 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 CTCFP49711 727 aaPredicted RBP11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 YTHDC1Q96MU7 727 aaKnown RBP11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 CDC5LQ99459 802 aaKnown RBP11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 ZC3H12CQ9C0D7 883 aaKnown RBP11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 GGA1Q9UJY5 639 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 XDHP47989 1333 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
PTP4A2-213ENST00000532001 NEURL1BA8MQ27 555 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms