RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.83■□□□□ 0.6
CCS-206ENST00000530961 FPGT-TNNI3KV9GXZ4 949 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 TNRC18O15417 2968 aaPredicted RBP18.83■□□□□ 0.6
CCS-206ENST00000530961 LTBP1Q14766 1721 aa18.83■□□□□ 0.6
CCS-206ENST00000530961 TAF1P21675 1872 aa18.82■□□□□ 0.6
CCS-206ENST00000530961 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
CCS-206ENST00000530961 DPF2Q92785 391 aa18.82■□□□□ 0.6
CCS-206ENST00000530961 FRAT2O75474 233 aaPredicted RBP18.81■□□□□ 0.6
CCS-206ENST00000530961 GTF2IP78347 998 aa18.81■□□□□ 0.6
CCS-206ENST00000530961 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
CCS-206ENST00000530961 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
CCS-206ENST00000530961 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
CCS-206ENST00000530961 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
CCS-206ENST00000530961 MYO3BQ8WXR4 1341 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 SEMA3EO15041 775 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
CCS-206ENST00000530961 ADORA1P30542 326 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 GMPSP49915 693 aaPredicted RBP18.8■□□□□ 0.6
CCS-206ENST00000530961 SCNN1DP51172 638 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 FKBP1AP62942 108 aaKnown RBP18.8■□□□□ 0.6
CCS-206ENST00000530961 DACT2Q5SW24 774 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 CCDC102BQ68D86 513 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 LRRCC1Q9C099 1032 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
CCS-206ENST00000530961 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
CCS-206ENST00000530961 FAM205AQ6ZU69 1335 aa18.79■□□□□ 0.6
CCS-206ENST00000530961 MMP14P50281 582 aa18.79■□□□□ 0.6
CCS-206ENST00000530961 PRPF38BQ5VTL8 546 aaKnown RBP18.79■□□□□ 0.6
CCS-206ENST00000530961 FBXW7Q969H0 707 aa18.79■□□□□ 0.6
CCS-206ENST00000530961 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
CCS-206ENST00000530961 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
CCS-206ENST00000530961 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
CCS-206ENST00000530961 POTECB2RU33 542 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 APBB1O00213 710 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 PHKA1P46020 1223 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 CCDC158Q5M9N0 1113 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 GMLQ99445 158 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 DENND2AQ9ULE3 1009 aa18.78■□□□□ 0.6
CCS-206ENST00000530961 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
CCS-206ENST00000530961 H7C1D1 291 aa18.77■□□□□ 0.6
CCS-206ENST00000530961 AACSQ86V21 672 aa18.77■□□□□ 0.6
CCS-206ENST00000530961 TBC1D22AQ8WUA7 517 aa18.77■□□□□ 0.6
CCS-206ENST00000530961 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
CCS-206ENST00000530961 IQSEC3Q9UPP2 1182 aaPredicted RBP18.77■□□□□ 0.6
CCS-206ENST00000530961 ZNF609O15014 1411 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 SBF1O95248 1867 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 TMEM88BA6NKF7 163 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 IFIT2P09913 472 aaKnown RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 EPHX2P34913 555 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 WDR66Q8TBY9 1149 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 ZNF512BQ96KM6 892 aaPredicted RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 DBNDD2Q9BQY9 259 aa18.76■□□□□ 0.59
CCS-206ENST00000530961 CCDC8Q9H0W5 538 aaPredicted RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 TAF1DQ9H5J8 278 aaPredicted RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 DBNLQ9UJU6 430 aaKnown RBP18.76■□□□□ 0.59
CCS-206ENST00000530961 NEFLP07196 543 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 USP17L8P0C7I0 530 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 EPS15P42566 896 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 MFSD14BQ5SR56 506 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 MICALL2Q8IY33 904 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 OGFOD1Q8N543 542 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 BEGAINQ9BUH8 593 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
CCS-206ENST00000530961 SUGT1Q9Y2Z0 365 aa18.75■□□□□ 0.59
CCS-206ENST00000530961 PDS5AQ29RF7 1337 aaKnown RBP18.74■□□□□ 0.59
CCS-206ENST00000530961 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
CCS-206ENST00000530961 ZNF280AP59817 542 aaPredicted RBP18.74■□□□□ 0.59
CCS-206ENST00000530961 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
CCS-206ENST00000530961 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
CCS-206ENST00000530961 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
CCS-206ENST00000530961 MXD3Q9BW11 206 aa18.74■□□□□ 0.59
CCS-206ENST00000530961 HDAC9Q9UKV0 1011 aa18.74■□□□□ 0.59
CCS-206ENST00000530961 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
CCS-206ENST00000530961 ZBTB47Q9UFB7 747 aaPredicted RBP18.73■□□□□ 0.59
CCS-206ENST00000530961 JAG2Q9Y219 1238 aa18.73■□□□□ 0.59
CCS-206ENST00000530961 IGHDP01880 384 aa18.72■□□□□ 0.59
CCS-206ENST00000530961 RASGRF1Q13972 1273 aa18.72■□□□□ 0.59
CCS-206ENST00000530961 SMC5Q8IY18 1101 aa18.72■□□□□ 0.59
CCS-206ENST00000530961 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
CCS-206ENST00000530961 TLR7Q9NYK1 1049 aaKnown RBP18.72■□□□□ 0.59
CCS-206ENST00000530961 PASKQ96RG2 1323 aa18.72■□□□□ 0.59
CCS-206ENST00000530961 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
CCS-206ENST00000530961 KIAA0825Q8IV33 1275 aa18.71■□□□□ 0.59
CCS-206ENST00000530961 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
CCS-206ENST00000530961 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
CCS-206ENST00000530961 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
CCS-206ENST00000530961 DEFB115Q30KQ5 88 aa18.7■□□□□ 0.58
CCS-206ENST00000530961 ANKRD45Q5TZF3 282 aa18.7■□□□□ 0.58
CCS-206ENST00000530961 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
CCS-206ENST00000530961 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 MCAMP43121 646 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 EAPPQ56P03 285 aaPredicted RBP18.69■□□□□ 0.58
CCS-206ENST00000530961 SPTY2D1Q68D10 685 aaPredicted RBP18.69■□□□□ 0.58
CCS-206ENST00000530961 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 LDHDQ86WU2 507 aa18.69■□□□□ 0.58
CCS-206ENST00000530961 ZC3H15Q8WU90 426 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms