RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 EPS8L1Q8TE68 723 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 KDM4CQ9H3R0 1056 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 GPBP1L1Q9HC44 474 aaPredicted RBP6.84□□□□□ -1.31
PCF11-205ENST00000530906 MIS18AQ9NYP9 233 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.31
PCF11-205ENST00000530906 STRCQ7RTU9 1775 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 PTK2Q05397 1052 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 MTX1Q13505 466 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 RNFT1Q5M7Z0 435 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 TBC1D9Q6ZT07 1266 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 IFNL2Q8IZJ0 200 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 ADAM32Q8TC27 787 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 SSH3Q8TE77 659 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 DNAAF4Q8WXU2 420 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 DCAF5Q96JK2 942 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 COL25A1Q9BXS0 654 aaPredicted RBP6.83□□□□□ -1.32
PCF11-205ENST00000530906 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 STAP2Q9UGK3 403 aa6.83□□□□□ -1.32
PCF11-205ENST00000530906 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 F6X3S4 739 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 GIGYF1O75420 1035 aaPredicted RBP6.82□□□□□ -1.32
PCF11-205ENST00000530906 PTMSP20962 102 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 RELBQ01201 579 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 LRRC59Q96AG4 307 aaKnown RBP6.82□□□□□ -1.32
PCF11-205ENST00000530906 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
PCF11-205ENST00000530906 USP44Q9H0E7 712 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 LGR6Q9HBX8 967 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 HMX1Q9NP08 348 aaPredicted RBP6.82□□□□□ -1.32
PCF11-205ENST00000530906 DDX21Q9NR30 783 aaKnown RBP eCLIP6.82□□□□□ -1.32
PCF11-205ENST00000530906 NLRP2Q9NX02 1062 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 TUBGCP6Q96RT7 1819 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 NHSL1Q5SYE7 1610 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 COL15A1P39059 1388 aa6.82□□□□□ -1.32
PCF11-205ENST00000530906 ABCA3Q99758 1704 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 SALL3Q9BXA9 1300 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 AP1G2O75843 785 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 PHKG2P15735 406 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 ITGA6P23229 1130 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 PDE1AP54750 535 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 XPCQ01831 940 aaPredicted RBP6.81□□□□□ -1.32
PCF11-205ENST00000530906 RABEP1Q15276 862 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 BEND3Q5T5X7 828 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 ZNF790Q6PG37 636 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 KSR2Q6VAB6 950 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 ERC1Q8IUD2 1116 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
PCF11-205ENST00000530906 LINS1Q8NG48 757 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 ANTXR1Q9H6X2 564 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 SLC52A2Q9HAB3 445 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 TMPRSS4Q9NRS4 437 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 CHMP5Q9NZZ3 219 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 KDM6AO15550 1401 aaPredicted RBP6.81□□□□□ -1.32
PCF11-205ENST00000530906 MEGF6O75095 1541 aa6.81□□□□□ -1.32
PCF11-205ENST00000530906 UTYO14607 1347 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 WDR17Q8IZU2 1322 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 PCDH11XQ9BZA7 1347 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 PCDH11YQ9BZA8 1340 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 LILRA1O75019 489 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 SNRPA1P09661 255 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 CSB-PGBD3P0DP91 1061 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 GSPT1P15170 499 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 MX1P20591 662 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 ADD1P35611 737 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 ZC3H6P61129 1189 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 ZNF385CQ66K41 422 aaPredicted RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 LARP1Q6PKG0 1096 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 BRINP3Q76B58 766 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 VWA5B2Q8N398 1253 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 RNF217Q8TC41 542 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 KIF1BPQ96EK5 621 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 LRRFIP2Q9Y608 721 aaKnown RBP6.8□□□□□ -1.32
PCF11-205ENST00000530906 ADCY9O60503 1353 aa6.8□□□□□ -1.32
PCF11-205ENST00000530906 TTC41PQ6P2S7 1318 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 USP42Q9H9J4 1324 aaKnown RBP6.79□□□□□ -1.32
PCF11-205ENST00000530906 PI4KAP2A4QPH2 592 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 ESPNB1AK53 854 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 ERVV-2B6SEH9 535 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 ERVH48-1M5A8F1 160 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 ERC2O15083 957 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 USP17L8P0C7I0 530 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 EIF2S2P20042 333 aaKnown RBP6.79□□□□□ -1.32
PCF11-205ENST00000530906 SDSP20132 328 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 MCCP23508 829 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 MCM2P49736 904 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 ANAPC15P60006 121 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 NEXNQ0ZGT2 675 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 NBPF20Q3BBV1 942 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 TTC5Q8N0Z6 440 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 PI4KAP1Q8N8J0 262 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 IL17RAQ96F46 866 aa6.79□□□□□ -1.32
PCF11-205ENST00000530906 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms