RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.83
BRCA2-204ENST00000530893 KIAA2012Q0VF49 1180 aa20.2■□□□□ 0.83
BRCA2-204ENST00000530893 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.83
BRCA2-204ENST00000530893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.2■□□□□ 0.83
BRCA2-204ENST00000530893 ZNF213O14771 459 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 GPAA1O43292 621 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 TPM3P06753 285 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 UQCRFS1P1P0C7P4 283 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 ADD2P35612 726 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 MB21D2Q8IYB1 491 aaPredicted RBP20.2■□□□□ 0.82
BRCA2-204ENST00000530893 ZNF34Q8IZ26 560 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 SYNE4Q8N205 404 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
BRCA2-204ENST00000530893 AHDC1Q5TGY3 1603 aaPredicted RBP20.2■□□□□ 0.82
BRCA2-204ENST00000530893 CARMIL3Q8ND23 1372 aa20.2■□□□□ 0.82
BRCA2-204ENST00000530893 MROH5Q6ZUA9 1318 aa20.19■□□□□ 0.82
BRCA2-204ENST00000530893 ARAP2Q8WZ64 1704 aa20.19■□□□□ 0.82
BRCA2-204ENST00000530893 ARID4AP29374 1257 aaPredicted RBP20.19■□□□□ 0.82
BRCA2-204ENST00000530893 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
BRCA2-204ENST00000530893 MRVI1Q9Y6F6 885 aa20.19■□□□□ 0.82
BRCA2-204ENST00000530893 CTAGE5O15320 804 aa20.18■□□□□ 0.82
BRCA2-204ENST00000530893 PRC1O43663 620 aa20.18■□□□□ 0.82
BRCA2-204ENST00000530893 NR1I2O75469 434 aa20.18■□□□□ 0.82
BRCA2-204ENST00000530893 CAMK4Q16566 473 aa20.18■□□□□ 0.82
BRCA2-204ENST00000530893 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
BRCA2-204ENST00000530893 DOT1LQ8TEK3 1739 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 PUM3Q15397 648 aaKnown RBP20.17■□□□□ 0.82
BRCA2-204ENST00000530893 CHST3Q7LGC8 479 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 LPIN2Q92539 896 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 NAP1L2Q9ULW6 460 aaPredicted RBP20.17■□□□□ 0.82
BRCA2-204ENST00000530893 SLC9C2Q5TAH2 1124 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 SASS6Q6UVJ0 657 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 PI16Q6UXB8 463 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
BRCA2-204ENST00000530893 GOLGA6L6A8MZA4 724 aa20.16■□□□□ 0.82
BRCA2-204ENST00000530893 TRDNQ13061 729 aa20.16■□□□□ 0.82
BRCA2-204ENST00000530893 SYTL4Q96C24 671 aaPredicted RBP20.16■□□□□ 0.82
BRCA2-204ENST00000530893 ROBO1Q9Y6N7 1651 aa20.16■□□□□ 0.82
BRCA2-204ENST00000530893 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
BRCA2-204ENST00000530893 EIF5P55010 431 aaKnown RBP20.15■□□□□ 0.82
BRCA2-204ENST00000530893 HAND2P61296 217 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 CCDC102BQ68D86 513 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 THRAP3Q9Y2W1 955 aaKnown RBP20.15■□□□□ 0.82
BRCA2-204ENST00000530893 KAT6BQ8WYB5 2073 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 FDPSP14324 419 aaKnown RBP20.15■□□□□ 0.82
BRCA2-204ENST00000530893 FGFR2P21802 821 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 CKAP2LQ8IYA6 745 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 PIBF1Q8WXW3 757 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
BRCA2-204ENST00000530893 ZMYM6O95789 1325 aa20.15■□□□□ 0.82
BRCA2-204ENST00000530893 KLF18A0A0U1RQI7 1052 aa20.14■□□□□ 0.81
BRCA2-204ENST00000530893 ANO6Q4KMQ2 910 aa20.14■□□□□ 0.81
BRCA2-204ENST00000530893 USP28Q96RU2 1077 aa20.14■□□□□ 0.81
BRCA2-204ENST00000530893 RREB1Q92766 1687 aa20.13■□□□□ 0.81
BRCA2-204ENST00000530893 GOLGA8BA8MQT2 603 aa20.13■□□□□ 0.81
BRCA2-204ENST00000530893 ANTXR2P58335 489 aa20.13■□□□□ 0.81
BRCA2-204ENST00000530893 CCDC73Q6ZRK6 1079 aa20.13■□□□□ 0.81
BRCA2-204ENST00000530893 HPS5Q9UPZ3 1129 aa20.13■□□□□ 0.81
BRCA2-204ENST00000530893 SLC5A1P13866 664 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 PLCB2Q00722 1185 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 ALX1Q15699 326 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 CBX8Q9HC52 389 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 PIH1D3Q9NQM4 214 aaKnown RBP20.12■□□□□ 0.81
BRCA2-204ENST00000530893 RTEL1Q9NZ71 1219 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 CPLX1O14810 134 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 AP5Z1O43299 807 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 IDH1O75874 414 aaKnown RBP20.12■□□□□ 0.81
BRCA2-204ENST00000530893 PDE6AP16499 860 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 PHKA1P46020 1223 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 BRAPQ7Z569 592 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
BRCA2-204ENST00000530893 FBXO18Q8NFZ0 1043 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 TDRD7Q8NHU6 1098 aaKnown RBP20.12■□□□□ 0.81
BRCA2-204ENST00000530893 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 CCDC87Q9NVE4 849 aa20.12■□□□□ 0.81
BRCA2-204ENST00000530893 ANGEL1Q9UNK9 670 aaKnown RBP20.12■□□□□ 0.81
BRCA2-204ENST00000530893 ZNF532Q9HCE3 1301 aa20.11■□□□□ 0.81
BRCA2-204ENST00000530893 RTL9Q8NET4 1388 aa20.11■□□□□ 0.81
BRCA2-204ENST00000530893 DOCK2Q92608 1830 aa20.11■□□□□ 0.81
BRCA2-204ENST00000530893 TCRBV5S4A2TA0A5A2 114 aa20.11■□□□□ 0.81
BRCA2-204ENST00000530893 FAM160A1Q05DH4 1040 aa20.11■□□□□ 0.81
BRCA2-204ENST00000530893 ILDR1Q86SU0 546 aaPredicted RBP20.11■□□□□ 0.81
BRCA2-204ENST00000530893 ZNF165P49910 485 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 CEBPZQ03701 1054 aaKnown RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 INTS5Q6P9B9 1019 aaKnown RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 GPHNQ9NQX3 736 aaPredicted RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 SLIT2O94813 1529 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 SPATA5Q8NB90 893 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 MYO5AQ9Y4I1 1855 aaKnown RBP20.1■□□□□ 0.81
BRCA2-204ENST00000530893 C4AP0C0L4 1744 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
BRCA2-204ENST00000530893 A0A1W2PQ27 194 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms