RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 C9orf78Q9NZ63 289 aaPredicted RBP11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 PALD1Q9ULE6 856 aa11.77□□□□□ -0.52
NCAPD3-208ENST00000530396 HSPA8P11142 646 aaKnown RBP11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 CCDC173Q0VFZ6 552 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 HSP90AB3PQ58FF7 597 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 KIAA1211Q6ZU35 1233 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 SUPT20HQ8NEM7 779 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 PANK2Q9BZ23 570 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 ANKRD36CQ5JPF3 1778 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 ECE1P42892 770 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 AOC3Q16853 763 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 TTC14Q96N46 770 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 RTFDC1Q9BY42 306 aaPredicted RBP11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 GPRC5DQ9NZD1 345 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 ZNRF3Q9ULT6 936 aa11.76□□□□□ -0.53
NCAPD3-208ENST00000530396 BBOX1O75936 387 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 CLCN1P35523 988 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 TICAM2Q86XR7 235 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 EVI5LQ96CN4 794 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
NCAPD3-208ENST00000530396 LAMB2P55268 1798 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 FMR1Q06787 632 aaKnown RBP eCLIP11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 CXCL9Q07325 125 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 PKP1Q13835 747 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 SP8Q8IXZ3 490 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 SNX14Q9Y5W7 946 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
NCAPD3-208ENST00000530396 TRAF5O00463 557 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 ANXA1P04083 346 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 IFIT2P09913 472 aaKnown RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 KIAA2012Q0VF49 1180 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 NEXNQ0ZGT2 675 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 ZSCAN23Q3MJ62 389 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 CST9Q5W186 159 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 MPNDQ8N594 471 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 METTL22Q9BUU2 404 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 RRAGDQ9NQL2 400 aaPredicted RBP11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 DIAPH3Q9NSV4 1193 aa11.73□□□□□ -0.53
NCAPD3-208ENST00000530396 SH3TC1Q8TE82 1336 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 GMPSP49915 693 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 GRAPQ13588 217 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 CIAPIN1Q6FI81 312 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 TMC4Q7Z404 712 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 GRAPLQ8TC17 118 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 SH2B1Q9NRF2 756 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.72□□□□□ -0.53
NCAPD3-208ENST00000530396 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 MAP2K2P36507 400 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 TNIP1Q15025 636 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 SYAP1Q96A49 352 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 IL25Q9H293 177 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 TRMT112Q9UI30 125 aaKnown RBP11.71□□□□□ -0.53
NCAPD3-208ENST00000530396 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 ESPNB1AK53 854 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 IGKV5-2P06315 115 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 GRM1Q13255 1194 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 GCKRQ14397 625 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 CAVIN1Q6NZI2 390 aaKnown RBP11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 SAPCD2Q86UD0 394 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 GPT2Q8TD30 523 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 UPF3BQ9BZI7 483 aaKnown RBP11.7□□□□□ -0.54
NCAPD3-208ENST00000530396 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms