RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 EYA2O00167 538 aa17.47■□□□□ 0.39
CTSB-217ENST00000530296 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
CTSB-217ENST00000530296 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
CTSB-217ENST00000530296 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
CTSB-217ENST00000530296 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
CTSB-217ENST00000530296 SHTN1A0MZ66 631 aa17.46■□□□□ 0.39
CTSB-217ENST00000530296 ATP8B2P98198 1209 aa17.46■□□□□ 0.39
CTSB-217ENST00000530296 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
CTSB-217ENST00000530296 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
CTSB-217ENST00000530296 IL15P40933 162 aaPredicted RBP17.45■□□□□ 0.38
CTSB-217ENST00000530296 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
CTSB-217ENST00000530296 UBE4AQ14139 1066 aa17.45■□□□□ 0.38
CTSB-217ENST00000530296 DOK7Q18PE1 504 aa17.45■□□□□ 0.38
CTSB-217ENST00000530296 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
CTSB-217ENST00000530296 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
CTSB-217ENST00000530296 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
CTSB-217ENST00000530296 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
CTSB-217ENST00000530296 PITPNM2Q9BZ72 1349 aa17.45■□□□□ 0.38
CTSB-217ENST00000530296 HMMRO75330 724 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 PDE8BO95263 885 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 SLC10A3P09131 477 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 MMP14P50281 582 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 ZNF280AP59817 542 aaPredicted RBP17.44■□□□□ 0.38
CTSB-217ENST00000530296 C15orf52Q6ZUT6 534 aaKnown RBP17.44■□□□□ 0.38
CTSB-217ENST00000530296 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
CTSB-217ENST00000530296 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
CTSB-217ENST00000530296 ADM5C9JUS6 153 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 TAF5LO75529 589 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 AAMPQ13685 434 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
CTSB-217ENST00000530296 PODNQ7Z5L7 613 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
CTSB-217ENST00000530296 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
CTSB-217ENST00000530296 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 EGFRP00533 1210 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTSB-217ENST00000530296 POLA2Q14181 598 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 PUM3Q15397 648 aaKnown RBP17.42■□□□□ 0.38
CTSB-217ENST00000530296 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
CTSB-217ENST00000530296 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 ZNF804AQ7Z570 1209 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 SIL1Q9H173 461 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
CTSB-217ENST00000530296 TRPA1O75762 1119 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 IFIT1P09914 478 aaKnown RBP17.41■□□□□ 0.38
CTSB-217ENST00000530296 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 ATG9AQ7Z3C6 839 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 CDCA5Q96FF9 252 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 KCNQ5Q9NR82 932 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 PSME4Q14997 1843 aa17.41■□□□□ 0.38
CTSB-217ENST00000530296 USP17L3A6NCW0 530 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 USP17L4A6NCW7 530 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 SCARF1Q14162 830 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 USP17L1Q7RTZ2 530 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
CTSB-217ENST00000530296 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
CTSB-217ENST00000530296 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 SCN9AQ15858 1988 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
CTSB-217ENST00000530296 PDE4DIPQ5VU43 2346 aa17.39■□□□□ 0.38
CTSB-217ENST00000530296 SLC5A1P13866 664 aa17.39■□□□□ 0.37
CTSB-217ENST00000530296 OS9Q13438 667 aaPredicted RBP17.39■□□□□ 0.37
CTSB-217ENST00000530296 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
CTSB-217ENST00000530296 OGFOD1Q8N543 542 aa17.39■□□□□ 0.37
CTSB-217ENST00000530296 LPIN2Q92539 896 aa17.39■□□□□ 0.37
CTSB-217ENST00000530296 MYOZ2Q9NPC6 264 aa17.39■□□□□ 0.37
CTSB-217ENST00000530296 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
CTSB-217ENST00000530296 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
CTSB-217ENST00000530296 SURF6O75683 361 aaKnown RBP17.38■□□□□ 0.37
CTSB-217ENST00000530296 NF2P35240 595 aa17.38■□□□□ 0.37
CTSB-217ENST00000530296 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
CTSB-217ENST00000530296 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
CTSB-217ENST00000530296 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
CTSB-217ENST00000530296 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
CTSB-217ENST00000530296 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
CTSB-217ENST00000530296 DLK2Q6UY11 383 aa17.37■□□□□ 0.37
CTSB-217ENST00000530296 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
CTSB-217ENST00000530296 GMLQ99445 158 aa17.37■□□□□ 0.37
CTSB-217ENST00000530296 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
CTSB-217ENST00000530296 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
CTSB-217ENST00000530296 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
CTSB-217ENST00000530296 CD209Q9NNX6 404 aa17.36■□□□□ 0.37
CTSB-217ENST00000530296 TNRC18O15417 2968 aaPredicted RBP17.35■□□□□ 0.37
CTSB-217ENST00000530296 SNAP23O00161 211 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 IL1R1P14778 569 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 FGFR2P21802 821 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 TXNRD3Q86VQ6 643 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 CRBNQ96SW2 442 aa17.35■□□□□ 0.37
CTSB-217ENST00000530296 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
CTSB-217ENST00000530296 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms