RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
CCDC90B-217ENST00000530253 RAC1P63000 192 aa12.55□□□□□ -0.4
CCDC90B-217ENST00000530253 BTLAQ7Z6A9 289 aa12.55□□□□□ -0.4
CCDC90B-217ENST00000530253 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
CCDC90B-217ENST00000530253 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-217ENST00000530253 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
CCDC90B-217ENST00000530253 ELNP15502 786 aa12.54□□□□□ -0.4
CCDC90B-217ENST00000530253 C8orf86Q6ZUL3 223 aa12.54□□□□□ -0.4
CCDC90B-217ENST00000530253 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-217ENST00000530253 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
CCDC90B-217ENST00000530253 NKTRP30414 1462 aaKnown RBP12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 DYRK3O43781 588 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 IER5Q5VY09 327 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 C2orf49Q9BVC5 232 aaPredicted RBP12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 TECPR2O15040 1411 aa12.53□□□□□ -0.4
CCDC90B-217ENST00000530253 CPS1P31327 1500 aa12.52□□□□□ -0.4
CCDC90B-217ENST00000530253 KNDC1Q76NI1 1749 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 SCO2A0A1W2PP80 73 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 SEC13P55735 322 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 PNMA5Q96PV4 448 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 RALGAPBQ86X10 1494 aa12.52□□□□□ -0.41
CCDC90B-217ENST00000530253 C21orf2O43822 256 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 KCNA6P17658 529 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 RASA1P20936 1047 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 PIP4K2BP78356 416 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 GRIK4Q16099 956 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 PTCH1Q13635 1447 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 LRRC7Q96NW7 1537 aa12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
CCDC90B-217ENST00000530253 EPB42P16452 691 aa12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 PCSK7Q16549 785 aa12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 RTN1Q16799 776 aa12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 SCG3Q8WXD2 468 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 GPRASP1Q5JY77 1395 aa12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 YTHDC2Q9H6S0 1430 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-217ENST00000530253 DLC1Q96QB1 1528 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 ROBO2Q9HCK4 1378 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 DKK1O94907 266 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 ADGRE1Q14246 886 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
CCDC90B-217ENST00000530253 TGFBR3LH3BV60 316 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 H2AFB2P0C5Z0 115 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 CCINQ13939 588 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 LENG1Q96BZ8 264 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-217ENST00000530253 ARHGEF28Q8N1W1 1705 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-217ENST00000530253 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
CCDC90B-217ENST00000530253 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-217ENST00000530253 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
CCDC90B-217ENST00000530253 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
CCDC90B-217ENST00000530253 TMEM94Q12767 1356 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 TOM1O60784 492 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 HSPA1LP34931 641 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 PRSS36Q5K4E3 855 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 PSAPL1Q6NUJ1 521 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 NUDT8Q8WV74 236 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 GLMNQ92990 594 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 KRTAP4-8Q9BYQ9 185 aa12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 MAFBQ9Y5Q3 323 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-217ENST00000530253 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 NALCNQ8IZF0 1738 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 SELPP16109 830 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 PSMG3-AS1Q96PY0 264 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
CCDC90B-217ENST00000530253 NFKB1P19838 968 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 IGFBP4P22692 258 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 ZFP64Q9NPA5 681 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 STK26Q9P289 416 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 ADGRL3Q9HAR2 1447 aa12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-217ENST00000530253 AFF1P51825 1210 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-217ENST00000530253 ARTNQ5T4W7 220 aa12.41□□□□□ -0.42
CCDC90B-217ENST00000530253 FMR1NBQ8N0W7 255 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-217ENST00000530253 DTWD1Q8N5C7 304 aa12.41□□□□□ -0.42
CCDC90B-217ENST00000530253 ADGRB2O60241 1585 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms