RNA–Protein interactions for RNA: ENST00000530170.1

RPS3-215, Transcript of ribosomal protein S3, human

TSL 5

Gene RPS3, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS3-215	ENST00000530170	RGL2	O15211	777 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	PFKFB2	O60825	505 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	PTCD1	O75127	700 aa	Known RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	STARD3NL	O95772	234 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	MSL1	Q68DK7	614 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	NAA16	Q6N069	864 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	RBM43	Q6ZSC3	357 aa	Known RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	DDX19A	Q9NUU7	478 aa	Known RBP	10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	CNPY2	Q9Y2B0	182 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	ZKSCAN5	Q9Y2L8	839 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	CD2AP	Q9Y5K6	639 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	KIAA1551	Q9HCM1	1747 aa		10.84	□□□□□ -0.67
RPS3-215	ENST00000530170	ERVV-1	B6SEH8	477 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	RNF113A	O15541	343 aa	Known RBP	10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	CAVIN2	O95810	425 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	CYP21A2	P08686	494 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	KCNQ4	P56696	695 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	LARP1B	Q659C4	914 aa	Known RBP	10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	DHX32	Q7L7V1	743 aa	Known RBP	10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	CEP126	Q9P2H0	1117 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	CTNNA3	Q9UI47	895 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	SBF2	Q86WG5	1849 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	MAST3	O60307	1309 aa		10.83	□□□□□ -0.68
RPS3-215	ENST00000530170	COL24A1	Q17RW2	1714 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170		A0A1B0GUL7	405 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	GADD45B	O75293	160 aa	Predicted RBP	10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	A1BG	P04217	495 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	CPA1	P15085	419 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	MSN	P26038	577 aa	Known RBP	10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	EXOSC10	Q01780	885 aa	Known RBP	10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	SLC27A3	Q5K4L6	730 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	ZNF274	Q96GC6	653 aa	Predicted RBP	10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	MAST2	Q6P0Q8	1798 aa		10.82	□□□□□ -0.68
RPS3-215	ENST00000530170	FIBP	O43427	364 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	TPM2	P07951	284 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	IFIT1	P09914	478 aa	Known RBP	10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	HSPA1A	P0DMV8	641 aa	Known RBP	10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	HSPA1B	P0DMV9	641 aa	Known RBP	10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	DNM1	Q05193	864 aa	Known RBP	10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	REST	Q13127	1097 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	CCDC57	Q2TAC2	916 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	CCDC158	Q5M9N0	1113 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	CDC37L1	Q7L3B6	337 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	APPBP2	Q92624	585 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	DNAJC2	Q99543	621 aa	Known RBP	10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	NMRK2	Q9NPI5	230 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	USP25	Q9UHP3	1055 aa		10.81	□□□□□ -0.68
RPS3-215	ENST00000530170	NID2	Q14112	1375 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	VPS37C	A5D8V6	355 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	OFD1	O75665	1012 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	TPM3	P06753	285 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	HSPD1	P10809	573 aa	Known RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	IL6ST	P40189	918 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	ZSCAN25	Q6NSZ9	544 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	DDX46	Q7L014	1031 aa	Known RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	TTC6	Q86TZ1	520 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	RBM46	Q8TBY0	533 aa	Known RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	EDC3	Q96F86	508 aa	Known RBP	10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	ZBTB3	Q9H5J0	574 aa		10.8	□□□□□ -0.68
RPS3-215	ENST00000530170	GOLIM4	O00461	696 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	CCDC192	P0DO97	292 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	HSP90B1	P14625	803 aa	Known RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	PIP4K2A	P48426	406 aa	Predicted RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	CTSW	P56202	376 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	IFIT5	Q13325	482 aa	Known RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	TTF1	Q15361	905 aa	Predicted RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170		Q6ZUG5	572 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	STOX1	Q6ZVD7	989 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	NLRP10	Q86W26	655 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	COL23A1	Q86Y22	540 aa	Predicted RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	VGLL2	Q8N8G2	317 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	NECAB1	Q8N987	351 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	NSUN7	Q8NE18	718 aa	Known RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	PIGB	Q92521	554 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	CHAMP1	Q96JM3	812 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	2e-11	■□□□□ 9.4
RPS3-215	ENST00000530170	GDPD2	Q9HCC8	539 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	CFAP45	Q9UL16	551 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	TAF6L	Q9Y6J9	622 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	DLEC1	Q9Y238	1755 aa		10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	MYH14	Q7Z406	1995 aa	Known RBP	10.79	□□□□□ -0.68
RPS3-215	ENST00000530170	MYH13	Q9UKX3	1938 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	CTAGE5	O15320	804 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	CYP19A1	P11511	503 aa	Predicted RBP	10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	ARID4A	P29374	1257 aa	Predicted RBP	10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	FSTL1	Q12841	308 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	MAP3K11	Q16584	847 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	LRRC24	Q50LG9	513 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	DNAJC10	Q8IXB1	793 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	FAM200A	Q8TCP9	573 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	LEO1	Q8WVC0	666 aa	Predicted RBP	10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	NUP62CL	Q9H1M0	184 aa		10.78	□□□□□ -0.68
RPS3-215	ENST00000530170	CLSTN2	Q9H4D0	955 aa		10.78	□□□□□ -0.68

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