RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
UBASH3B-205ENST00000529998 ADARB2Q9NS39 739 aaKnown RBP10.74□□□□□ -0.69
UBASH3B-205ENST00000529998 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
UBASH3B-205ENST00000529998 ZNF609O15014 1411 aa10.74□□□□□ -0.69
UBASH3B-205ENST00000529998 H7C1D1 291 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 PHKA1P46020 1223 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 HIRAP54198 1017 aaPredicted RBP10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 PNMA8AQ86V59 439 aaPredicted RBP10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 XAGE2Q96GT9 111 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 AKAP2Q9Y2D5 859 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 FAM205AQ6ZU69 1335 aa10.73□□□□□ -0.69
UBASH3B-205ENST00000529998 HMMRO75330 724 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 USP17L8P0C7I0 530 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 ZNF280AP59817 542 aaPredicted RBP10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 TBC1D10BQ4KMP7 808 aaPredicted RBP10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 CHADLQ6NUI6 762 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 USP50Q70EL3 339 aaPredicted RBP10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 LDHDQ86WU2 507 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 KIAA0825Q8IV33 1275 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
UBASH3B-205ENST00000529998 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 COL1A1P02452 1464 aaPredicted RBP10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 CHAF1AQ13111 956 aaPredicted RBP10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 GRIK5Q16478 980 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 TNNI3KQ59H18 835 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 CCDC102BQ68D86 513 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 SMC1BQ8NDV3 1235 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 MYO3BQ8WXR4 1341 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 GPR108Q9NPR9 543 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 FPGT-TNNI3KV9GXZ4 949 aa10.71□□□□□ -0.69
UBASH3B-205ENST00000529998 F8W031 263 aaPredicted RBP10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 APBB1O00213 710 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 FSTL1Q12841 308 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 MFSD14BQ5SR56 506 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 MAP1SQ66K74 1059 aaPredicted RBP10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 IL1RAPL2Q9NP60 686 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 MYOZ2Q9NPC6 264 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 PGAP2Q9UHJ9 254 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 AKAP11Q9UKA4 1901 aa10.7□□□□□ -0.7
UBASH3B-205ENST00000529998 ASTN2O75129 1339 aaPredicted RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 ITGBL1O95965 494 aaPredicted RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 KIF4BQ2VIQ3 1234 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 GORABQ5T7V8 394 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 ERC1Q8IUD2 1116 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 CNTROBQ8N137 903 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 OGFOD1Q8N543 542 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 GNL3LQ9NVN8 582 aaKnown RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 TLR7Q9NYK1 1049 aaKnown RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
UBASH3B-205ENST00000529998 MYO5AQ9Y4I1 1855 aaKnown RBP10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 ECM29Q5VYK3 1845 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 SEMA3EO15041 775 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 ZBTB22O15209 634 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 RAB11FIP3O75154 756 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 RASGRF1Q13972 1273 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 SCARF1Q14162 830 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 TBC1D22AQ8WUA7 517 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 KIF1BPQ96EK5 621 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 DCTPP1Q9H773 170 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 TTF2Q9UNY4 1162 aaKnown RBP10.68□□□□□ -0.7
UBASH3B-205ENST00000529998 WNT10BO00744 389 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 SMARCA5O60264 1052 aaPredicted RBP10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 ARID4AP29374 1257 aaPredicted RBP10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 MMP14P50281 582 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 DLK2Q6UY11 383 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 AACSQ86V21 672 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 WDR66Q8TBY9 1149 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 ZBED3Q96IU2 234 aaPredicted RBP10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 HMG20BQ9P0W2 317 aa10.67□□□□□ -0.7
UBASH3B-205ENST00000529998 TRPM7Q96QT4 1865 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 AOX1Q06278 1338 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 PASKQ96RG2 1323 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 TRAF5O00463 557 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 HSPA6P17066 643 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 MCAMP43121 646 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 AAMPQ13685 434 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 DLGAP5Q15398 846 aa10.66□□□□□ -0.7
UBASH3B-205ENST00000529998 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms