RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 SNAP23O00161 211 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 PPP1R12BO60237 982 aaPredicted RBP15.36■□□□□ 0.05
USH1C-208ENST00000529563 PTPN12Q05209 780 aaKnown RBP15.36■□□□□ 0.05
USH1C-208ENST00000529563 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 MIER1Q8N108 512 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 SLC10A4Q96EP9 437 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 JAG2Q9Y219 1238 aa15.36■□□□□ 0.05
USH1C-208ENST00000529563 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
USH1C-208ENST00000529563 CLRN2A0PK11 232 aa15.35■□□□□ 0.05
USH1C-208ENST00000529563 GRM8O00222 908 aa15.35■□□□□ 0.05
USH1C-208ENST00000529563 FOXO4P98177 505 aa15.35■□□□□ 0.05
USH1C-208ENST00000529563 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
USH1C-208ENST00000529563 ZNF296Q8WUU4 475 aaPredicted RBP15.35■□□□□ 0.05
USH1C-208ENST00000529563 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
USH1C-208ENST00000529563 TM4SF4P48230 202 aa15.34■□□□□ 0.05
USH1C-208ENST00000529563 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
USH1C-208ENST00000529563 SUPT20HL1Q3ZLR7 823 aa15.34■□□□□ 0.05
USH1C-208ENST00000529563 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
USH1C-208ENST00000529563 PPP2R3BQ9Y5P8 575 aa15.34■□□□□ 0.05
USH1C-208ENST00000529563 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.05
USH1C-208ENST00000529563 GPR25O00155 361 aa15.33■□□□□ 0.04
USH1C-208ENST00000529563 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
USH1C-208ENST00000529563 IL1R1P14778 569 aa15.33■□□□□ 0.04
USH1C-208ENST00000529563 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
USH1C-208ENST00000529563 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
USH1C-208ENST00000529563 CERS5Q8N5B7 392 aa15.33■□□□□ 0.04
USH1C-208ENST00000529563 FKTNO75072 461 aa15.32■□□□□ 0.04
USH1C-208ENST00000529563 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
USH1C-208ENST00000529563 ALDH1L1O75891 902 aa15.32■□□□□ 0.04
USH1C-208ENST00000529563 IREB2P48200 963 aaKnown RBP15.32■□□□□ 0.04
USH1C-208ENST00000529563 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
USH1C-208ENST00000529563 ZBED3Q96IU2 234 aaPredicted RBP15.32■□□□□ 0.04
USH1C-208ENST00000529563 FZD1Q9UP38 647 aa15.32■□□□□ 0.04
USH1C-208ENST00000529563 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
USH1C-208ENST00000529563 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 MANSC4A6NHS7 340 aaPredicted RBP15.31■□□□□ 0.04
USH1C-208ENST00000529563 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 FKBP1AP62942 108 aaKnown RBP15.31■□□□□ 0.04
USH1C-208ENST00000529563 TNFAIP1Q13829 316 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 EPHA10Q5JZY3 1008 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
USH1C-208ENST00000529563 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
USH1C-208ENST00000529563 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
USH1C-208ENST00000529563 INHBEP58166 350 aa15.3■□□□□ 0.04
USH1C-208ENST00000529563 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
USH1C-208ENST00000529563 OTUD7BQ6GQQ9 843 aa15.3■□□□□ 0.04
USH1C-208ENST00000529563 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
USH1C-208ENST00000529563 TTF2Q9UNY4 1162 aaKnown RBP15.3■□□□□ 0.04
USH1C-208ENST00000529563 PCDHAC2Q9Y5I4 1007 aa15.3■□□□□ 0.04
USH1C-208ENST00000529563 GYG1P46976 350 aa15.29■□□□□ 0.04
USH1C-208ENST00000529563 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
USH1C-208ENST00000529563 WNK4Q96J92 1243 aa15.29■□□□□ 0.04
USH1C-208ENST00000529563 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
USH1C-208ENST00000529563 MROH5Q6ZUA9 1318 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 IRS2Q9Y4H2 1338 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
USH1C-208ENST00000529563 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
USH1C-208ENST00000529563 RASA3Q14644 834 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 METTL24Q5JXM2 366 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 NBPF12Q5TAG4 269 aaPredicted RBP15.28■□□□□ 0.04
USH1C-208ENST00000529563 FBXO46Q6PJ61 603 aaPredicted RBP15.28■□□□□ 0.04
USH1C-208ENST00000529563 SUCLG2Q96I99 432 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 CLMNQ96JQ2 1002 aa15.28■□□□□ 0.04
USH1C-208ENST00000529563 TNNI2P48788 182 aa15.27■□□□□ 0.04
USH1C-208ENST00000529563 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
USH1C-208ENST00000529563 IFNL1Q8IU54 200 aa15.27■□□□□ 0.04
USH1C-208ENST00000529563 ANKRD13AQ8IZ07 590 aa15.27■□□□□ 0.04
USH1C-208ENST00000529563 ZNF70Q9UC06 446 aaPredicted RBP15.27■□□□□ 0.04
USH1C-208ENST00000529563 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 UNCXA6NJT0 531 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 TCP10L2B9ZVM9 353 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 MAP3K11Q16584 847 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 TDRD7Q8NHU6 1098 aaKnown RBP15.26■□□□□ 0.03
USH1C-208ENST00000529563 PUS3Q9BZE2 481 aaKnown RBP15.26■□□□□ 0.03
USH1C-208ENST00000529563 TDRD3Q9H7E2 651 aaKnown RBP15.26■□□□□ 0.03
USH1C-208ENST00000529563 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
USH1C-208ENST00000529563 TRIM17Q9Y577 477 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
USH1C-208ENST00000529563 ECM29Q5VYK3 1845 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
USH1C-208ENST00000529563 CRKP46108 304 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
USH1C-208ENST00000529563 FAM84BQ96KN1 310 aaPredicted RBP15.25■□□□□ 0.03
USH1C-208ENST00000529563 CFHR5Q9BXR6 569 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 BICC1Q9H694 974 aaKnown RBP15.25■□□□□ 0.03
USH1C-208ENST00000529563 ELP3Q9H9T3 547 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
USH1C-208ENST00000529563 USP2O75604 605 aaPredicted RBP15.24■□□□□ 0.03
USH1C-208ENST00000529563 SLC34A2O95436 690 aa15.24■□□□□ 0.03
USH1C-208ENST00000529563 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
USH1C-208ENST00000529563 ERO1AQ96HE7 468 aa15.24■□□□□ 0.03
USH1C-208ENST00000529563 CSADQ9Y600 493 aa15.24■□□□□ 0.03
USH1C-208ENST00000529563 SSC5DA1L4H1 1573 aa15.24■□□□□ 0.03
USH1C-208ENST00000529563 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms