RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 A0A1B0GUL6 1792 aa11.33□□□□□ -0.6
CMTM1-210ENST00000528441 MYO1BO43795 1136 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 SASH1O94885 1247 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 EGFRP00533 1210 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 IFIT1P09914 478 aaKnown RBP11.32□□□□□ -0.6
CMTM1-210ENST00000528441 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
CMTM1-210ENST00000528441 NF2P35240 595 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 GYG1P46976 350 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 VEGFBP49765 207 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 DACT2Q5SW24 774 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 UTYO14607 1347 aa11.32□□□□□ -0.6
CMTM1-210ENST00000528441 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
CMTM1-210ENST00000528441 BCAR3O75815 825 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 GNAI3P08754 354 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 SLC5A1P13866 664 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 HUNKP57058 714 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 DLGAP5Q15398 846 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 GBA2Q9HCG7 927 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-210ENST00000528441 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
CMTM1-210ENST00000528441 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
CMTM1-210ENST00000528441 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
CMTM1-210ENST00000528441 MNX1P50219 401 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-210ENST00000528441 EVX2Q03828 476 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-210ENST00000528441 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 KAZALD1Q96I82 304 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 MEIS3Q99687 375 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 SCAF8Q9UPN6 1271 aaKnown RBP11.3□□□□□ -0.6
CMTM1-210ENST00000528441 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
CMTM1-210ENST00000528441 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
CMTM1-210ENST00000528441 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 EYA2O00167 538 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-210ENST00000528441 OS9Q13438 667 aaPredicted RBP11.29□□□□□ -0.6
CMTM1-210ENST00000528441 PUM3Q15397 648 aaKnown RBP11.29□□□□□ -0.6
CMTM1-210ENST00000528441 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 ARHGAP45Q92619 1136 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
CMTM1-210ENST00000528441 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 PDE8BO95263 885 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 GNAI2P04899 355 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 TRIM27P14373 513 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-210ENST00000528441 PRKG1Q13976 671 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 CST9Q5W186 159 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
CMTM1-210ENST00000528441 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
CMTM1-210ENST00000528441 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
CMTM1-210ENST00000528441 CEP350Q5VT06 3117 aa11.27□□□□□ -0.6
CMTM1-210ENST00000528441 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
CMTM1-210ENST00000528441 CLRN2A0PK11 232 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 WNT10BO00744 389 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 AOC2O75106 756 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 IL1R1P14778 569 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 MMP14P50281 582 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-210ENST00000528441 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-210ENST00000528441 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 C15orf52Q6ZUT6 534 aaKnown RBP11.27□□□□□ -0.61
CMTM1-210ENST00000528441 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
CMTM1-210ENST00000528441 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.61
CMTM1-210ENST00000528441 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
CMTM1-210ENST00000528441 ZNF609O15014 1411 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-210ENST00000528441 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
CMTM1-210ENST00000528441 RGMBQ6NW40 437 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
CMTM1-210ENST00000528441 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 LPIN2Q92539 896 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-210ENST00000528441 GMLQ99445 158 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
CMTM1-210ENST00000528441 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
CMTM1-210ENST00000528441 BCAMP50895 628 aa11.25□□□□□ -0.61
CMTM1-210ENST00000528441 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
CMTM1-210ENST00000528441 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMTM1-210ENST00000528441 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
CMTM1-210ENST00000528441 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms