RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 LDHAP00338 332 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 RBP3P10745 1247 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 FAM161AQ3B820 660 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 TMC2Q8TDI7 906 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 NELL1Q92832 810 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 FAM163AQ96GL9 167 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 L3MBTL3Q96JM7 780 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 IP6K2Q9UHH9 426 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 ODF2LQ9ULJ1 636 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 COL4A6Q14031 1691 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 CNTNAP1P78357 1384 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 DYTNA2CJ06 578 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 BBOX1O75936 387 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 TSPAN7P41732 249 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 HNRNPUL2Q1KMD3 747 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 LMNTD2Q8IXW0 634 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 DCAF11Q8TEB1 546 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 TSR2Q969E8 191 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 POLR3CQ9BUI4 534 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 RMI1Q9H9A7 625 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 PNPLA7Q6ZV29 1317 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 HOXD10P28358 340 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 USP5P45974 858 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 RAD51AP2Q09MP3 1159 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 FXNQ16595 210 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 PODNQ7Z5L7 613 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 CFAP53Q96M91 514 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 IFT57Q9NWB7 429 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 ACAD8Q9UKU7 415 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 NOL7Q9UMY1 257 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 PCDHGA4Q9Y5G9 962 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 PITPNM2Q9BZ72 1349 aa4.47□□□□□ -1.69
PTPN22-207ENST00000528414 MYH14Q7Z406 1995 aaKnown RBP4.47□□□□□ -1.69
PTPN22-207ENST00000528414 TPPPO94811 219 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 ALDH1B1P30837 517 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 CBLBQ13191 982 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 LDLRAD1Q5T700 205 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 C9orf131Q5VYM1 1079 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 ARHGEF25Q86VW2 580 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 SUGP1Q8IWZ8 645 aaKnown RBP4.46□□□□□ -1.69
PTPN22-207ENST00000528414 KLHL23Q8NBE8 558 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 NUCKS1Q9H1E3 243 aaKnown RBP4.46□□□□□ -1.69
PTPN22-207ENST00000528414 PAXBP1Q9Y5B6 917 aa4.46□□□□□ -1.69
PTPN22-207ENST00000528414 PRC1O43663 620 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 OATP04181 439 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 IQCEQ6IPM2 695 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 ZCCHC8Q6NZY4 707 aaKnown RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 SAMD3Q8N6K7 520 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 GOLGA1Q92805 767 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 DCAF5Q96JK2 942 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 TSPYL2Q9H2G4 693 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 TMCC3Q9ULS5 477 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 ZNF330Q9Y3S2 320 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 DCAF8L1A6NGE4 600 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 POM121CA8CG34 1229 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 IFRD1O00458 451 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 RNASEH2AO75792 299 aaKnown RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 HOXC13P31276 330 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 ATICP31939 592 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 POU5F1BQ06416 359 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 SMCR8Q8TEV9 937 aaPredicted RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 PBXIP1Q96AQ6 731 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 ERP27Q96DN0 273 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 MED4Q9NPJ6 270 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 CHCHD3Q9NX63 227 aaKnown RBP4.46□□□□□ -1.7
PTPN22-207ENST00000528414 CLIC5Q9NZA1 410 aa4.46□□□□□ -1.7
PTPN22-207ENST00000528414 TPM3P06753 285 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 NEFHP12036 1026 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 GPSM2P81274 684 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 AMPD3Q01432 767 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 MECOMQ03112 1051 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 PPP2R5BQ15173 497 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 HSP90B2PQ58FF3 399 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 MORC1Q86VD1 984 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 JDP2Q8WYK2 163 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 TBC1D20Q96BZ9 403 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 SLC26A8Q96RN1 970 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 NELL2Q99435 816 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 PDGFDQ9GZP0 370 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-207ENST00000528414 PNNQ9H307 717 aaKnown RBP4.45□□□□□ -1.7
PTPN22-207ENST00000528414 UTP6Q9NYH9 597 aaKnown RBP4.45□□□□□ -1.7
PTPN22-207ENST00000528414 SYNGAP1Q96PV0 1343 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 CHL1O00533 1208 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 TOMM70O94826 608 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 SLC7A5Q01650 507 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 C10orf62Q5T681 223 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-207ENST00000528414 ALKBH2Q6NS38 261 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 UBE2Q1Q7Z7E8 422 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 SYT17Q9BSW7 474 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 TEX13AQ9BXU3 409 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-207ENST00000528414 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 CASP8AP2Q9UKL3 1982 aa4.45□□□□□ -1.7
PTPN22-207ENST00000528414 A0A1W2PPC1 479 aa4.44□□□□□ -1.7
PTPN22-207ENST00000528414 HOXA10P31260 410 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-207ENST00000528414 STIP1P31948 543 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms