RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 CSF1RP07333 972 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 FOSBP53539 338 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 CASP7P55210 303 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 GPSM2P81274 684 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 TTLL12Q14166 644 aaPredicted RBP9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 SLC51AQ86UW1 340 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 DDRGK1Q96HY6 314 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 MPHOSPH8Q99549 860 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 ZNRF3Q9ULT6 936 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 GJA3Q9Y6H8 435 aa9.05□□□□□ -0.96
PTP4A2-210ENST00000528253 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 ANKRD18BA2A2Z9 1011 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 POTECB2RU33 542 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 ITGA6P23229 1130 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 FSTL1Q12841 308 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 TNIP1Q15025 636 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 PARP9Q8IXQ6 854 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 SMC1BQ8NDV3 1235 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 ZC3H12CQ9C0D7 883 aaKnown RBP9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 BSDC1Q9NW68 430 aaPredicted RBP9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 PODXL2Q9NZ53 605 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 POLLQ9UGP5 575 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 HACL1Q9UJ83 578 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 GGA1Q9UJY5 639 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 NOB1Q9ULX3 412 aaKnown RBP9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 CHMP3Q9Y3E7 222 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 XDHP47989 1333 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
PTP4A2-210ENST00000528253 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 UFL1O94874 794 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 HSPA6P17066 643 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 ATP2B4P23634 1241 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 RARSP54136 660 aaKnown RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 FOXO4P98177 505 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 IFIT5Q13325 482 aaKnown RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 CCDC57Q2TAC2 916 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 PNMA8AQ86V59 439 aaPredicted RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 ZNF454Q8N9F8 522 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 TBC1D16Q8TBP0 767 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 API5Q9BZZ5 524 aaKnown RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 MINPP1Q9UNW1 487 aa9.03□□□□□ -0.96
PTP4A2-210ENST00000528253 LTBP1Q14766 1721 aa9.02□□□□□ -0.96
PTP4A2-210ENST00000528253 COL4A1P02462 1669 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 COL4A5P29400 1685 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 NUDT7P0C024 238 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 CXCL9Q07325 125 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 FAM161AQ3B820 660 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 CIAPIN1Q6FI81 312 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 LMBR1LQ6UX01 489 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 ANKRD2Q9GZV1 360 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 CEP350Q5VT06 3117 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 UTYO14607 1347 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
PTP4A2-210ENST00000528253 PSME4Q14997 1843 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 RAD17O75943 681 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 NBPF7P0C2Y1 421 aaPredicted RBP9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 EPHX2P34913 555 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 APLP1P51693 650 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 EAPPQ56P03 285 aaPredicted RBP9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 ARSIQ5FYB1 569 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 ARHGAP45Q92619 1136 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 DBNDD1Q9H9R9 158 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 DUOX1Q9NRD9 1551 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 LEMD3Q9Y2U8 911 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 ZBED9Q6R2W3 1325 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 SCN9AQ15858 1988 aa9.01□□□□□ -0.97
PTP4A2-210ENST00000528253 H7C1D1 291 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 ECE2O60344 883 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 KCNJ4P48050 445 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 EPHA10Q5JZY3 1008 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 LDHAL6AQ6ZMR3 332 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 LDHDQ86WU2 507 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 SUCLG2Q96I99 432 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 GPR101Q96P66 508 aaPredicted RBP9□□□□□ -0.97
PTP4A2-210ENST00000528253 USP44Q9H0E7 712 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 CNNM1Q9NRU3 951 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
PTP4A2-210ENST00000528253 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
PTP4A2-210ENST00000528253 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 YDJCA8MPS7 323 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 CLCN1P35523 988 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 EPS15P42566 896 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 GMPSP49915 693 aaPredicted RBP8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 SCNN1DP51172 638 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 CHRNDQ07001 517 aa8.99□□□□□ -0.97
PTP4A2-210ENST00000528253 USP50Q70EL3 339 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms