RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 R3HCC1Q9Y3T6 440 aaKnown RBP17.46■□□□□ 0.39
USP47-207ENST00000527733 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
USP47-207ENST00000527733 CIAO1O76071 339 aa17.46■□□□□ 0.39
USP47-207ENST00000527733 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.38
USP47-207ENST00000527733 SLC27A2O14975 620 aa17.46■□□□□ 0.38
USP47-207ENST00000527733 GSPT1P15170 499 aaKnown RBP17.46■□□□□ 0.38
USP47-207ENST00000527733 CERS3Q8IU89 383 aa17.46■□□□□ 0.38
USP47-207ENST00000527733 VEZTQ9HBM0 779 aa17.46■□□□□ 0.38
USP47-207ENST00000527733 PDE8BO95263 885 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 APOBRQ0VD83 1088 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 MPNDQ8N594 471 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
USP47-207ENST00000527733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
USP47-207ENST00000527733 SYCE3A1L190 88 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 SERPINC1P01008 464 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 EDC3Q96F86 508 aaKnown RBP17.45■□□□□ 0.38
USP47-207ENST00000527733 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 MAST3O60307 1309 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
USP47-207ENST00000527733 OFD1O75665 1012 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 NOC3LQ8WTT2 800 aaKnown RBP17.44■□□□□ 0.38
USP47-207ENST00000527733 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 RTL9Q8NET4 1388 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 TNIP1Q15025 636 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 CAMK4Q16566 473 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 TBC1D22AQ8WUA7 517 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 ZNF532Q9HCE3 1301 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
USP47-207ENST00000527733 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
USP47-207ENST00000527733 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
USP47-207ENST00000527733 TRAF1Q13077 416 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 ZNF592Q92610 1267 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 SNX14Q9Y5W7 946 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 CPA1P15085 419 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 CHRNDQ07001 517 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 FSIP1Q8NA03 581 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 HAUS7Q99871 368 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 DDX19AQ9NUU7 478 aaKnown RBP17.43■□□□□ 0.38
USP47-207ENST00000527733 DCCP43146 1447 aa17.43■□□□□ 0.38
USP47-207ENST00000527733 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
USP47-207ENST00000527733 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 CCDC173Q0VFZ6 552 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 SLIT1O75093 1534 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 CTAGE5O15320 804 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 UBE4AQ14139 1066 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
USP47-207ENST00000527733 RPS6KA4O75676 772 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
USP47-207ENST00000527733 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 OSBPL3Q9H4L5 887 aa17.42■□□□□ 0.38
USP47-207ENST00000527733 H7C1W4 665 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 DBNLQ9UJU6 430 aaKnown RBP17.41■□□□□ 0.38
USP47-207ENST00000527733 B4E1Z4 1266 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 GYG1P46976 350 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 SPATA31A6Q5VVP1 1343 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 SERPINB2P05120 415 aa17.41■□□□□ 0.38
USP47-207ENST00000527733 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.38
USP47-207ENST00000527733 UBE2HP62256 183 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 DSCC1Q9BVC3 393 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 ARHGAP23Q9P227 1491 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 SMTNL1A8MU46 457 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 HSPA4P34932 840 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 KDM4FA0A1W2PPD8 638 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 BCAMP50895 628 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 ANO10Q9NW15 660 aa17.4■□□□□ 0.38
USP47-207ENST00000527733 PTPN12Q05209 780 aaKnown RBP17.4■□□□□ 0.38
USP47-207ENST00000527733 CCAR2Q8N163 923 aaKnown RBP17.4■□□□□ 0.38
USP47-207ENST00000527733 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 F13A1P00488 732 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 SMARCE1Q969G3 411 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 BMP15O95972 392 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 DHX8Q14562 1220 aaKnown RBP17.39■□□□□ 0.37
USP47-207ENST00000527733 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 CNNM3Q8NE01 707 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 CNKSR1Q969H4 720 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 USP32Q8NFA0 1604 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
USP47-207ENST00000527733 TNNI2P48788 182 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 POLA2Q14181 598 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 VPS72Q15906 364 aa17.39■□□□□ 0.37
USP47-207ENST00000527733 WDR78Q5VTH9 848 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 ZKSCAN3Q9BRR0 538 aa17.38■□□□□ 0.37
USP47-207ENST00000527733 SAP30BPQ9UHR5 308 aaKnown RBP17.38■□□□□ 0.37
USP47-207ENST00000527733 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms