RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 AGBL3Q8NEM8 1001 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 TDRD7Q8NHU6 1098 aaKnown RBP28.61■■■□□ 2.17
LRRK1-206ENST00000527698 CLEC11AQ9Y240 323 aa28.61■■■□□ 2.17
LRRK1-206ENST00000527698 ZNF609O15014 1411 aa28.6■■■□□ 2.17
LRRK1-206ENST00000527698 CAPN15O75808 1086 aa28.6■■■□□ 2.17
LRRK1-206ENST00000527698 EXOC6BQ9Y2D4 811 aa28.6■■■□□ 2.17
LRRK1-206ENST00000527698 FRAT2O75474 233 aaPredicted RBP28.59■■■□□ 2.17
LRRK1-206ENST00000527698 FKBP1AP62942 108 aaKnown RBP28.59■■■□□ 2.17
LRRK1-206ENST00000527698 PCDHB15Q9Y5E8 787 aa28.59■■■□□ 2.17
LRRK1-206ENST00000527698 SEMA3EO15041 775 aa28.58■■■□□ 2.17
LRRK1-206ENST00000527698 TIMM10P62072 90 aa28.58■■■□□ 2.17
LRRK1-206ENST00000527698 RSBN1LQ6PCB5 846 aaPredicted RBP28.58■■■□□ 2.17
LRRK1-206ENST00000527698 EXOC6Q8TAG9 804 aa28.58■■■□□ 2.17
LRRK1-206ENST00000527698 NEUROD6Q96NK8 337 aa28.58■■■□□ 2.17
LRRK1-206ENST00000527698 DCTPP1Q9H773 170 aa28.58■■■□□ 2.17
LRRK1-206ENST00000527698 BCAMP50895 628 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 HDAC1Q13547 482 aaPredicted RBP28.57■■■□□ 2.16
LRRK1-206ENST00000527698 TNNI3KQ59H18 835 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 GORABQ5T7V8 394 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 CNTROBQ8N137 903 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 RHPN1Q8TCX5 695 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 KCNQ5Q9NR82 932 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 FPGT-TNNI3KV9GXZ4 949 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 MYH13Q9UKX3 1938 aa28.57■■■□□ 2.16
LRRK1-206ENST00000527698 VEGFBP49765 207 aa28.56■■■□□ 2.16
LRRK1-206ENST00000527698 FAM205AQ6ZU69 1335 aa28.56■■■□□ 2.16
LRRK1-206ENST00000527698 CLASRPQ8N2M8 674 aaKnown RBP28.56■■■□□ 2.16
LRRK1-206ENST00000527698 TBC1D22AQ8WUA7 517 aa28.56■■■□□ 2.16
LRRK1-206ENST00000527698 XAGE2Q96GT9 111 aa28.56■■■□□ 2.16
LRRK1-206ENST00000527698 GPRC5DQ9NZD1 345 aa28.56■■■□□ 2.16
LRRK1-206ENST00000527698 H7C1D1 291 aa28.55■■■□□ 2.16
LRRK1-206ENST00000527698 GMPSP49915 693 aaPredicted RBP28.55■■■□□ 2.16
LRRK1-206ENST00000527698 GTF2IP78347 998 aa28.55■■■□□ 2.16
LRRK1-206ENST00000527698 DACT2Q5SW24 774 aa28.55■■■□□ 2.16
LRRK1-206ENST00000527698 RWDD1Q9H446 243 aaPredicted RBP28.55■■■□□ 2.16
LRRK1-206ENST00000527698 RASSF10A6NK89 507 aa28.54■■■□□ 2.16
LRRK1-206ENST00000527698 FOXN1O15353 648 aa28.54■■■□□ 2.16
LRRK1-206ENST00000527698 LRRCC1Q9C099 1032 aa28.54■■■□□ 2.16
LRRK1-206ENST00000527698 PRDM10Q9NQV6 1147 aa28.54■■■□□ 2.16
LRRK1-206ENST00000527698 SCNN1DP51172 638 aa28.53■■■□□ 2.16
LRRK1-206ENST00000527698 CCDC158Q5M9N0 1113 aa28.53■■■□□ 2.16
LRRK1-206ENST00000527698 MAP1SQ66K74 1059 aaPredicted RBP28.53■■■□□ 2.16
LRRK1-206ENST00000527698 CCDC102BQ68D86 513 aa28.53■■■□□ 2.16
LRRK1-206ENST00000527698 FBXW7Q969H0 707 aa28.53■■■□□ 2.16
LRRK1-206ENST00000527698 DENND2AQ9ULE3 1009 aa28.53■■■□□ 2.16
LRRK1-206ENST00000527698 OGFOD1Q8N543 542 aa28.52■■■□□ 2.16
LRRK1-206ENST00000527698 WDR66Q8TBY9 1149 aa28.52■■■□□ 2.16
LRRK1-206ENST00000527698 GCC1Q96CN9 775 aa28.52■■■□□ 2.16
LRRK1-206ENST00000527698 CNOT7Q9UIV1 285 aaKnown RBP28.52■■■□□ 2.16
LRRK1-206ENST00000527698 PDS5AQ29RF7 1337 aaKnown RBP28.51■■■□□ 2.15
LRRK1-206ENST00000527698 ZNF646O15015 1829 aaPredicted RBP28.51■■■□□ 2.15
LRRK1-206ENST00000527698 UQCRFS1P1P0C7P4 283 aa28.51■■■□□ 2.15
LRRK1-206ENST00000527698 USP50Q70EL3 339 aaPredicted RBP28.51■■■□□ 2.15
LRRK1-206ENST00000527698 AIDAQ96BJ3 306 aa28.51■■■□□ 2.15
LRRK1-206ENST00000527698 GMLQ99445 158 aa28.51■■■□□ 2.15
LRRK1-206ENST00000527698 ADARB2Q9NS39 739 aaKnown RBP28.51■■■□□ 2.15
LRRK1-206ENST00000527698 SUGT1Q9Y2Z0 365 aa28.51■■■□□ 2.15
LRRK1-206ENST00000527698 USP17L8P0C7I0 530 aa28.5■■■□□ 2.15
LRRK1-206ENST00000527698 CTCFP49711 727 aaPredicted RBP28.5■■■□□ 2.15
LRRK1-206ENST00000527698 DEFB115Q30KQ5 88 aa28.5■■■□□ 2.15
LRRK1-206ENST00000527698 HDAC9Q9UKV0 1011 aa28.5■■■□□ 2.15
LRRK1-206ENST00000527698 ZBTB12Q9Y330 459 aaPredicted RBP28.5■■■□□ 2.15
LRRK1-206ENST00000527698 ADORA1P30542 326 aa28.49■■■□□ 2.15
LRRK1-206ENST00000527698 ZNF512BQ96KM6 892 aaPredicted RBP28.49■■■□□ 2.15
LRRK1-206ENST00000527698 WBP1LQ9NX94 342 aa28.49■■■□□ 2.15
LRRK1-206ENST00000527698 ZBTB47Q9UFB7 747 aaPredicted RBP28.49■■■□□ 2.15
LRRK1-206ENST00000527698 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.49■■■□□ 2.15
LRRK1-206ENST00000527698 PHKA1P46020 1223 aa28.48■■■□□ 2.15
LRRK1-206ENST00000527698 AACSQ86V21 672 aa28.48■■■□□ 2.15
LRRK1-206ENST00000527698 MICALL2Q8IY33 904 aa28.48■■■□□ 2.15
LRRK1-206ENST00000527698 ZGPATQ8N5A5 531 aaKnown RBP28.48■■■□□ 2.15
LRRK1-206ENST00000527698 EAF2Q96CJ1 260 aaPredicted RBP28.48■■■□□ 2.15
LRRK1-206ENST00000527698 TRPM7Q96QT4 1865 aa28.48■■■□□ 2.15
LRRK1-206ENST00000527698 APBB1O00213 710 aa28.47■■■□□ 2.15
LRRK1-206ENST00000527698 IFIT2P09913 472 aaKnown RBP28.47■■■□□ 2.15
LRRK1-206ENST00000527698 ARID4AP29374 1257 aaPredicted RBP28.47■■■□□ 2.15
LRRK1-206ENST00000527698 EPS15P42566 896 aa28.47■■■□□ 2.15
LRRK1-206ENST00000527698 ZNF280AP59817 542 aaPredicted RBP28.47■■■□□ 2.15
LRRK1-206ENST00000527698 MFSD14BQ5SR56 506 aa28.47■■■□□ 2.15
LRRK1-206ENST00000527698 IRX6P78412 446 aaPredicted RBP28.46■■■□□ 2.15
LRRK1-206ENST00000527698 TTC39AQ5SRH9 613 aa28.46■■■□□ 2.15
LRRK1-206ENST00000527698 IL1RAPL2Q9NP60 686 aa28.46■■■□□ 2.15
LRRK1-206ENST00000527698 THSD7BQ9C0I4 1608 aa28.45■■■□□ 2.14
LRRK1-206ENST00000527698 NEFLP07196 543 aa28.45■■■□□ 2.14
LRRK1-206ENST00000527698 IQSEC3Q9UPP2 1182 aaPredicted RBP28.45■■■□□ 2.14
LRRK1-206ENST00000527698 SALL1Q9NSC2 1324 aa28.44■■■□□ 2.14
LRRK1-206ENST00000527698 IGSF3O75054 1194 aa28.44■■■□□ 2.14
LRRK1-206ENST00000527698 CHAF1AQ13111 956 aaPredicted RBP28.44■■■□□ 2.14
LRRK1-206ENST00000527698 ZC3H15Q8WU90 426 aaKnown RBP28.44■■■□□ 2.14
LRRK1-206ENST00000527698 DBNDD2Q9BQY9 259 aa28.44■■■□□ 2.14
LRRK1-206ENST00000527698 CCDC8Q9H0W5 538 aaPredicted RBP28.44■■■□□ 2.14
LRRK1-206ENST00000527698 DBNLQ9UJU6 430 aaKnown RBP28.44■■■□□ 2.14
LRRK1-206ENST00000527698 MAST3O60307 1309 aa28.43■■■□□ 2.14
LRRK1-206ENST00000527698 WDR33Q9C0J8 1336 aaKnown RBP28.43■■■□□ 2.14
LRRK1-206ENST00000527698 ABT1Q9ULW3 272 aaKnown RBP28.43■■■□□ 2.14
LRRK1-206ENST00000527698 MAP2K1Q02750 393 aaPredicted RBP28.42■■■□□ 2.14
LRRK1-206ENST00000527698 SPTY2D1Q68D10 685 aaPredicted RBP28.42■■■□□ 2.14
LRRK1-206ENST00000527698 MRIQ9BWK5 157 aa28.42■■■□□ 2.14
LRRK1-206ENST00000527698 HDLBPQ00341 1268 aaKnown RBP28.41■■■□□ 2.14
LRRK1-206ENST00000527698 RASGRF1Q13972 1273 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms