RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 H7C1D1 291 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 EPHX2P34913 555 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 GORABQ5T7V8 394 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 CCDC102BQ68D86 513 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
USH1C-206ENST00000527551 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
USH1C-206ENST00000527551 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
USH1C-206ENST00000527551 DENND2AQ9ULE3 1009 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 ADAMTSL1Q8N6G6 1762 aa15.72■□□□□ 0.11
USH1C-206ENST00000527551 TOMM70O94826 608 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 UQCRFS1P1P0C7P4 283 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 ZNF280AP59817 542 aaPredicted RBP15.71■□□□□ 0.11
USH1C-206ENST00000527551 OGFOD1Q8N543 542 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 WDR66Q8TBY9 1149 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 FBXW7Q969H0 707 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 ZNF512BQ96KM6 892 aaPredicted RBP15.71■□□□□ 0.11
USH1C-206ENST00000527551 LRRCC1Q9C099 1032 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 SUGT1Q9Y2Z0 365 aa15.71■□□□□ 0.11
USH1C-206ENST00000527551 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
USH1C-206ENST00000527551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.71■□□□□ 0.11
USH1C-206ENST00000527551 ADORA1P30542 326 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 PHKA1P46020 1223 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 CCDC158Q5M9N0 1113 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 MICALL2Q8IY33 904 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
USH1C-206ENST00000527551 GCC1Q96CN9 775 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
USH1C-206ENST00000527551 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
USH1C-206ENST00000527551 SALL1Q9NSC2 1324 aa15.69■□□□□ 0.1
USH1C-206ENST00000527551 ARID4AP29374 1257 aaPredicted RBP15.69■□□□□ 0.1
USH1C-206ENST00000527551 EPS15P42566 896 aa15.69■□□□□ 0.1
USH1C-206ENST00000527551 MFSD14BQ5SR56 506 aa15.69■□□□□ 0.1
USH1C-206ENST00000527551 LDHDQ86WU2 507 aa15.69■□□□□ 0.1
USH1C-206ENST00000527551 ZGPATQ8N5A5 531 aaKnown RBP15.69■□□□□ 0.1
USH1C-206ENST00000527551 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
USH1C-206ENST00000527551 ECM29Q5VYK3 1845 aa15.68■□□□□ 0.1
USH1C-206ENST00000527551 IGSF3O75054 1194 aa15.68■□□□□ 0.1
USH1C-206ENST00000527551 AACSQ86V21 672 aa15.68■□□□□ 0.1
USH1C-206ENST00000527551 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
USH1C-206ENST00000527551 DBNLQ9UJU6 430 aaKnown RBP15.68■□□□□ 0.1
USH1C-206ENST00000527551 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
USH1C-206ENST00000527551 MAST3O60307 1309 aa15.68■□□□□ 0.1
USH1C-206ENST00000527551 IFIT2P09913 472 aaKnown RBP15.67■□□□□ 0.1
USH1C-206ENST00000527551 FSTL1Q12841 308 aa15.67■□□□□ 0.1
USH1C-206ENST00000527551 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
USH1C-206ENST00000527551 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
USH1C-206ENST00000527551 DBNDD2Q9BQY9 259 aa15.67■□□□□ 0.1
USH1C-206ENST00000527551 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
USH1C-206ENST00000527551 IQSEC3Q9UPP2 1182 aaPredicted RBP15.67■□□□□ 0.1
USH1C-206ENST00000527551 COL1A1P02452 1464 aaPredicted RBP15.66■□□□□ 0.1
USH1C-206ENST00000527551 APBB1O00213 710 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 HDLBPQ00341 1268 aaKnown RBP15.66■□□□□ 0.1
USH1C-206ENST00000527551 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
USH1C-206ENST00000527551 RASGRF1Q13972 1273 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 MTMR14Q8NCE2 650 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 SMC1BQ8NDV3 1235 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 CCDC8Q9H0W5 538 aaPredicted RBP15.66■□□□□ 0.1
USH1C-206ENST00000527551 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
USH1C-206ENST00000527551 EAPPQ56P03 285 aaPredicted RBP15.65■□□□□ 0.1
USH1C-206ENST00000527551 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
USH1C-206ENST00000527551 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
USH1C-206ENST00000527551 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
USH1C-206ENST00000527551 SPATA5Q8NB90 893 aa15.65■□□□□ 0.1
USH1C-206ENST00000527551 MXD3Q9BW11 206 aa15.65■□□□□ 0.1
USH1C-206ENST00000527551 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
USH1C-206ENST00000527551 SERPINA10Q9UK55 444 aa15.65■□□□□ 0.1
USH1C-206ENST00000527551 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
USH1C-206ENST00000527551 KIF4BQ2VIQ3 1234 aa15.64■□□□□ 0.09
USH1C-206ENST00000527551 SMC5Q8IY18 1101 aa15.64■□□□□ 0.09
USH1C-206ENST00000527551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.64■□□□□ 0.09
USH1C-206ENST00000527551 HMG20BQ9P0W2 317 aa15.64■□□□□ 0.09
USH1C-206ENST00000527551 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
USH1C-206ENST00000527551 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
USH1C-206ENST00000527551 MCAMP43121 646 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 TBC1D10BQ4KMP7 808 aaPredicted RBP15.63■□□□□ 0.09
USH1C-206ENST00000527551 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
USH1C-206ENST00000527551 SAMD7Q7Z3H4 446 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 TRPM4Q8TD43 1214 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 GPATCH3Q96I76 525 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
USH1C-206ENST00000527551 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 PITPNM2Q9BZ72 1349 aa15.63■□□□□ 0.09
USH1C-206ENST00000527551 MAST2Q6P0Q8 1798 aa15.62■□□□□ 0.09
USH1C-206ENST00000527551 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
USH1C-206ENST00000527551 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
USH1C-206ENST00000527551 NEFLP07196 543 aa15.62■□□□□ 0.09
USH1C-206ENST00000527551 HIRAP54198 1017 aaPredicted RBP15.62■□□□□ 0.09
USH1C-206ENST00000527551 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
USH1C-206ENST00000527551 SLF2Q8IX21 1173 aa15.62■□□□□ 0.09
USH1C-206ENST00000527551 DOCK2Q92608 1830 aa15.61■□□□□ 0.09
USH1C-206ENST00000527551 MYH2Q9UKX2 1941 aa15.61■□□□□ 0.09
USH1C-206ENST00000527551 MYO1BO43795 1136 aa15.61■□□□□ 0.09
USH1C-206ENST00000527551 HHIPL2Q6UWX4 724 aa15.61■□□□□ 0.09
USH1C-206ENST00000527551 TEKT1Q969V4 418 aa15.61■□□□□ 0.09
USH1C-206ENST00000527551 ZBED3Q96IU2 234 aaPredicted RBP15.61■□□□□ 0.09
USH1C-206ENST00000527551 POLR2AP24928 1970 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms