RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 UTRNP46939 3433 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 PSMD14O00487 310 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 COL4A5P29400 1685 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 IRS2Q9Y4H2 1338 aa12.85□□□□□ -0.35
UBQLN1-204ENST00000527373 IL1R1P14778 569 aa12.84□□□□□ -0.35
UBQLN1-204ENST00000527373 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
UBQLN1-204ENST00000527373 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
UBQLN1-204ENST00000527373 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
UBQLN1-204ENST00000527373 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
UBQLN1-204ENST00000527373 TIAM2Q8IVF5 1701 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 GLTPD2A6NH11 291 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 DENND2AQ9ULE3 1009 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.36
UBQLN1-204ENST00000527373 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 GPC2Q8N158 579 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
UBQLN1-204ENST00000527373 F8W031 263 aaPredicted RBP12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 MFSD14BQ5SR56 506 aa12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 RSBN1LQ6PCB5 846 aaPredicted RBP12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
UBQLN1-204ENST00000527373 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 SEMA3EO15041 775 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 NUCB1Q02818 461 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 DACT2Q5SW24 774 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 SPATA5Q8NB90 893 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 BOLA2Q9H3K6 86 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
UBQLN1-204ENST00000527373 H7C1D1 291 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 ARID4AP29374 1257 aaPredicted RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 MCAMP43121 646 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 SCARF1Q14162 830 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 RBM26Q5T8P6 1007 aaKnown RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 OTUD7AQ8TE49 926 aaPredicted RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 TBC1D22AQ8WUA7 517 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 DNAJC2Q99543 621 aaKnown RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 CNOT7Q9UIV1 285 aaKnown RBP12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
UBQLN1-204ENST00000527373 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 RPS12P25398 132 aaKnown RBP12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 ZAP70P43403 619 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 AGBL3Q8NEM8 1001 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 NDUFB9Q9Y6M9 179 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
UBQLN1-204ENST00000527373 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 IQCA1LA6NCM1 817 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 ERC2O15083 957 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 MX1P20591 662 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 EPS15P42566 896 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 SCNN1DP51172 638 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 RBM5P52756 815 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 FKBP1AP62942 108 aaKnown RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 EAPPQ56P03 285 aaPredicted RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 SPTY2D1Q68D10 685 aaPredicted RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 CERS5Q8N5B7 392 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 DPF2Q92785 391 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 TTF2Q9UNY4 1162 aaKnown RBP12.77□□□□□ -0.37
UBQLN1-204ENST00000527373 ATP5JP18859 108 aa12.76□□□□□ -0.37
UBQLN1-204ENST00000527373 GRIK5Q16478 980 aa12.76□□□□□ -0.37
UBQLN1-204ENST00000527373 TBC1D10BQ4KMP7 808 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms