RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 HDAC9Q9UKV0 1011 aa20.15■□□□□ 0.82
CTSB-213ENST00000527215 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
CTSB-213ENST00000527215 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
CTSB-213ENST00000527215 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
CTSB-213ENST00000527215 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
CTSB-213ENST00000527215 PITPNM2Q9BZ72 1349 aa20.14■□□□□ 0.81
CTSB-213ENST00000527215 IPO8O15397 1037 aaKnown RBP20.14■□□□□ 0.81
CTSB-213ENST00000527215 SASH1O94885 1247 aa20.14■□□□□ 0.81
CTSB-213ENST00000527215 TRIM27P14373 513 aa20.14■□□□□ 0.81
CTSB-213ENST00000527215 HIBADHP31937 336 aaKnown RBP20.14■□□□□ 0.81
CTSB-213ENST00000527215 MMP14P50281 582 aa20.14■□□□□ 0.81
CTSB-213ENST00000527215 PTPN12Q05209 780 aaKnown RBP20.14■□□□□ 0.81
CTSB-213ENST00000527215 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
CTSB-213ENST00000527215 FAM84BQ96KN1 310 aaPredicted RBP20.14■□□□□ 0.81
CTSB-213ENST00000527215 EYA2O00167 538 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 WNT10BO00744 389 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 PDE8BO95263 885 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 HSPA8P11142 646 aaKnown RBP20.13■□□□□ 0.81
CTSB-213ENST00000527215 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
CTSB-213ENST00000527215 CDCA5Q96FF9 252 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
CTSB-213ENST00000527215 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
CTSB-213ENST00000527215 MAP2K2P36507 400 aa20.12■□□□□ 0.81
CTSB-213ENST00000527215 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
CTSB-213ENST00000527215 GBA2Q9HCG7 927 aaPredicted RBP20.12■□□□□ 0.81
CTSB-213ENST00000527215 PAPPA2Q9BXP8 1791 aa20.12■□□□□ 0.81
CTSB-213ENST00000527215 FAM205AQ6ZU69 1335 aa20.11■□□□□ 0.81
CTSB-213ENST00000527215 F8W031 263 aaPredicted RBP20.11■□□□□ 0.81
CTSB-213ENST00000527215 CLUAP1Q96AJ1 413 aa20.11■□□□□ 0.81
CTSB-213ENST00000527215 GNAI3P08754 354 aa20.1■□□□□ 0.81
CTSB-213ENST00000527215 HUNKP57058 714 aa20.1■□□□□ 0.81
CTSB-213ENST00000527215 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
CTSB-213ENST00000527215 C2orf69Q8N8R5 385 aa20.1■□□□□ 0.81
CTSB-213ENST00000527215 ZBED3Q96IU2 234 aaPredicted RBP20.1■□□□□ 0.81
CTSB-213ENST00000527215 SIL1Q9H173 461 aa20.1■□□□□ 0.81
CTSB-213ENST00000527215 AOC2O75106 756 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 FGFR2P21802 821 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 PUM3Q15397 648 aaKnown RBP20.09■□□□□ 0.81
CTSB-213ENST00000527215 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 ZKSCAN2Q63HK3 967 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 VPS37DQ86XT2 251 aa20.09■□□□□ 0.81
CTSB-213ENST00000527215 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
CTSB-213ENST00000527215 CA12O43570 354 aa20.08■□□□□ 0.81
CTSB-213ENST00000527215 DLGAP5Q15398 846 aa20.08■□□□□ 0.81
CTSB-213ENST00000527215 MFSD14BQ5SR56 506 aa20.08■□□□□ 0.81
CTSB-213ENST00000527215 FBXO3Q9UK99 471 aa20.08■□□□□ 0.81
CTSB-213ENST00000527215 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
CTSB-213ENST00000527215 CIAO1O76071 339 aa20.07■□□□□ 0.8
CTSB-213ENST00000527215 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
CTSB-213ENST00000527215 BCAMP50895 628 aa20.07■□□□□ 0.8
CTSB-213ENST00000527215 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
CTSB-213ENST00000527215 PA2G4Q9UQ80 394 aaKnown RBP20.07■□□□□ 0.8
CTSB-213ENST00000527215 AKAP11Q9UKA4 1901 aa20.06■□□□□ 0.8
CTSB-213ENST00000527215 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
CTSB-213ENST00000527215 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
CTSB-213ENST00000527215 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
CTSB-213ENST00000527215 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
CTSB-213ENST00000527215 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
CTSB-213ENST00000527215 SLC5A1P13866 664 aa20.05■□□□□ 0.8
CTSB-213ENST00000527215 CHAF1AQ13111 956 aaPredicted RBP20.05■□□□□ 0.8
CTSB-213ENST00000527215 NOGQ13253 232 aa20.05■□□□□ 0.8
CTSB-213ENST00000527215 RGMBQ6NW40 437 aa20.05■□□□□ 0.8
CTSB-213ENST00000527215 LPIN2Q92539 896 aa20.05■□□□□ 0.8
CTSB-213ENST00000527215 COPRSQ9NQ92 184 aa20.05■□□□□ 0.8
CTSB-213ENST00000527215 SPDYE2BA6NHP3 402 aa20.04■□□□□ 0.8
CTSB-213ENST00000527215 SRGAP3O43295 1099 aa20.04■□□□□ 0.8
CTSB-213ENST00000527215 SPDYE6P0CI01 402 aa20.04■□□□□ 0.8
CTSB-213ENST00000527215 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
CTSB-213ENST00000527215 MTX1Q13505 466 aa20.04■□□□□ 0.8
CTSB-213ENST00000527215 CEP126Q9P2H0 1117 aa20.04■□□□□ 0.8
CTSB-213ENST00000527215 TTF2Q9UNY4 1162 aaKnown RBP20.04■□□□□ 0.8
CTSB-213ENST00000527215 COL1A1P02452 1464 aaPredicted RBP20.04■□□□□ 0.8
CTSB-213ENST00000527215 GNAI2P04899 355 aa20.03■□□□□ 0.8
CTSB-213ENST00000527215 IL15P40933 162 aaPredicted RBP20.03■□□□□ 0.8
CTSB-213ENST00000527215 ATP2B3Q16720 1220 aa20.03■□□□□ 0.8
CTSB-213ENST00000527215 PRMT6Q96LA8 375 aaPredicted RBP20.03■□□□□ 0.8
CTSB-213ENST00000527215 AOX1Q06278 1338 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 CLRN2A0PK11 232 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 FAM155AB1AL88 458 aaPredicted RBP20.02■□□□□ 0.8
CTSB-213ENST00000527215 MYO1BO43795 1136 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 ZNF157P51786 506 aaPredicted RBP20.02■□□□□ 0.8
CTSB-213ENST00000527215 FKBP1BP68106 108 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 GRIK5Q16478 980 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 MOB2Q70IA6 237 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 TBC1D22AQ8WUA7 517 aa20.02■□□□□ 0.8
CTSB-213ENST00000527215 FTSJ3Q8IY81 847 aaKnown RBP20.01■□□□□ 0.79
CTSB-213ENST00000527215 ABHD8Q96I13 439 aa20.01■□□□□ 0.79
CTSB-213ENST00000527215 ZIC5Q96T25 663 aa20.01■□□□□ 0.79
CTSB-213ENST00000527215 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
CTSB-213ENST00000527215 NF2P35240 595 aa20■□□□□ 0.79
CTSB-213ENST00000527215 DZIP1LQ8IYY4 767 aaKnown RBP20■□□□□ 0.79
CTSB-213ENST00000527215 CCDC102AQ96A19 550 aa20■□□□□ 0.79
CTSB-213ENST00000527215 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
CTSB-213ENST00000527215 VEZTQ9HBM0 779 aa20■□□□□ 0.79
CTSB-213ENST00000527215 SLC10A3P09131 477 aa19.99■□□□□ 0.79
CTSB-213ENST00000527215 RLBP1P12271 317 aa19.99■□□□□ 0.79
CTSB-213ENST00000527215 CRKP46108 304 aa19.99■□□□□ 0.79
CTSB-213ENST00000527215 TTLL12Q14166 644 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms