RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 RGMBQ6NW40 437 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
SSBP3-210ENST00000525990 ZNF804AQ7Z570 1209 aa15.19■□□□□ 0.02
SSBP3-210ENST00000525990 ZBED3Q96IU2 234 aaPredicted RBP15.19■□□□□ 0.02
SSBP3-210ENST00000525990 OTOFQ9HC10 1997 aa15.18■□□□□ 0.02
SSBP3-210ENST00000525990 ZNF157P51786 506 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-210ENST00000525990 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
SSBP3-210ENST00000525990 FZD1Q9UP38 647 aa15.18■□□□□ 0.02
SSBP3-210ENST00000525990 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-210ENST00000525990 SSC5DA1L4H1 1573 aa15.17■□□□□ 0.02
SSBP3-210ENST00000525990 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-210ENST00000525990 NOGQ13253 232 aa15.17■□□□□ 0.02
SSBP3-210ENST00000525990 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
SSBP3-210ENST00000525990 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-210ENST00000525990 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
SSBP3-210ENST00000525990 UBE2Q2LH0YL09 131 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 SLC10A3P09131 477 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-210ENST00000525990 KIF23Q02241 960 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-210ENST00000525990 PRKG1Q13976 671 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 UBE4AQ14139 1066 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 GRIK5Q16478 980 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 RASAL3Q86YV0 1011 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 MIER1Q8N108 512 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
SSBP3-210ENST00000525990 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 RARSP54136 660 aaKnown RBP15.15■□□□□ 0.02
SSBP3-210ENST00000525990 CFAP100Q494V2 611 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 METTL24Q5JXM2 366 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 TDRD7Q8NHU6 1098 aaKnown RBP15.15■□□□□ 0.02
SSBP3-210ENST00000525990 LAMB1P07942 1786 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 FAM205AQ6ZU69 1335 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 MROH5Q6ZUA9 1318 aa15.15■□□□□ 0.02
SSBP3-210ENST00000525990 HIBADHP31937 336 aaKnown RBP15.14■□□□□ 0.01
SSBP3-210ENST00000525990 DLGAP5Q15398 846 aa15.14■□□□□ 0.01
SSBP3-210ENST00000525990 PRMT6Q96LA8 375 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-210ENST00000525990 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
SSBP3-210ENST00000525990 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
SSBP3-210ENST00000525990 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
SSBP3-210ENST00000525990 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-210ENST00000525990 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
SSBP3-210ENST00000525990 CCDC102AQ96A19 550 aa15.13■□□□□ 0.01
SSBP3-210ENST00000525990 MEIS3Q99687 375 aa15.13■□□□□ 0.01
SSBP3-210ENST00000525990 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
SSBP3-210ENST00000525990 PDE8BO95263 885 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 CT47B1P0C2W7 299 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 BCAMP50895 628 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 FKBP1AP62942 108 aaKnown RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 MKRN3Q13064 507 aaKnown RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 APOBEC3FQ8IUX4 373 aaKnown RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 MTMR14Q8NCE2 650 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 SIL1Q9H173 461 aa15.12■□□□□ 0.01
SSBP3-210ENST00000525990 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
SSBP3-210ENST00000525990 UBTFL1P0CB47 393 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-210ENST00000525990 FGFR2P21802 821 aa15.11■□□□□ 0.01
SSBP3-210ENST00000525990 RBM5P52756 815 aaKnown RBP eCLIP15.11■□□□□ 0.01
SSBP3-210ENST00000525990 FKBP1BP68106 108 aa15.11■□□□□ 0.01
SSBP3-210ENST00000525990 DEFB129Q9H1M3 183 aa15.11■□□□□ 0.01
SSBP3-210ENST00000525990 VEZTQ9HBM0 779 aa15.11■□□□□ 0.01
SSBP3-210ENST00000525990 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SSBP3-210ENST00000525990 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
SSBP3-210ENST00000525990 PA2G4Q9UQ80 394 aaKnown RBP15.11■□□□□ 0.01
SSBP3-210ENST00000525990 EYA2O00167 538 aa15.1■□□□□ 0.01
SSBP3-210ENST00000525990 TRPA1O75762 1119 aa15.1■□□□□ 0.01
SSBP3-210ENST00000525990 BCAR3O75815 825 aa15.1■□□□□ 0.01
SSBP3-210ENST00000525990 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
SSBP3-210ENST00000525990 API5Q9BZZ5 524 aaKnown RBP15.1■□□□□ 0.01
SSBP3-210ENST00000525990 RNF186Q9NXI6 227 aa15.1■□□□□ 0.01
SSBP3-210ENST00000525990 CA12O43570 354 aa15.09■□□□□ 0.01
SSBP3-210ENST00000525990 MMP14P50281 582 aa15.09■□□□□ 0.01
SSBP3-210ENST00000525990 NBPF12Q5TAG4 269 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-210ENST00000525990 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
SSBP3-210ENST00000525990 VPS37DQ86XT2 251 aa15.09■□□□□ 0.01
SSBP3-210ENST00000525990 ABHD8Q96I13 439 aa15.09■□□□□ 0.01
SSBP3-210ENST00000525990 TDRD3Q9H7E2 651 aaKnown RBP15.09■□□□□ 0.01
SSBP3-210ENST00000525990 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
SSBP3-210ENST00000525990 NF2P35240 595 aa15.08■□□□□ 0
SSBP3-210ENST00000525990 PUM3Q15397 648 aaKnown RBP15.08■□□□□ 0
SSBP3-210ENST00000525990 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
SSBP3-210ENST00000525990 KIF16BQ96L93 1317 aa15.08■□□□□ 0
SSBP3-210ENST00000525990 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
SSBP3-210ENST00000525990 TRIM27P14373 513 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 CRKP46108 304 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 HNRNPUQ00839 825 aaKnown RBP eCLIP15.07■□□□□ 03e-6■□□□□ 10.4
SSBP3-210ENST00000525990 RASA3Q14644 834 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 CAVIN4Q5BKX8 364 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 DZIP1LQ8IYY4 767 aaKnown RBP15.07■□□□□ 0
SSBP3-210ENST00000525990 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
SSBP3-210ENST00000525990 CLUAP1Q96AJ1 413 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 ZNF70Q9UC06 446 aaPredicted RBP15.07■□□□□ 0
SSBP3-210ENST00000525990 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
SSBP3-210ENST00000525990 MYO1BO43795 1136 aa15.06■□□□□ 0
SSBP3-210ENST00000525990 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
SSBP3-210ENST00000525990 CACNB3P54284 484 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms