RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 PPP2R3BQ9Y5P8 575 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 CEP290O15078 2479 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 F8W031 263 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 GNAI1P63096 354 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 SP3Q02447 781 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 CCDC30Q5VVM6 783 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 PTPN18Q99952 460 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 CD209Q9NNX6 404 aa16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 COLQQ9Y215 455 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-205ENST00000525916 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 SNAP23O00161 211 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 ITGA6P23229 1130 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 KCNJ4P48050 445 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 OTUD7BQ6GQQ9 843 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 MTMR14Q8NCE2 650 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 ZNF333Q96JL9 665 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 VEZTQ9HBM0 779 aa16.04■□□□□ 0.16
CCDC90B-205ENST00000525916 IRS2Q9Y4H2 1338 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 USP2O75604 605 aaPredicted RBP16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 CHRNDQ07001 517 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 NEXNQ0ZGT2 675 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 SUPT20HL1Q3ZLR7 823 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 CFAP100Q494V2 611 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 TSPYL6Q8N831 410 aa16.03■□□□□ 0.16
CCDC90B-205ENST00000525916 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 UNCXA6NJT0 531 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 H7C1W4 665 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 MYO1BO43795 1136 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 ANKRD13AQ8IZ07 590 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 PRMT6Q96LA8 375 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 ELP3Q9H9T3 547 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.16
CCDC90B-205ENST00000525916 SZT2Q5T011 3432 aa16.02■□□□□ 0.15
CCDC90B-205ENST00000525916 SLC9C1Q4G0N8 1177 aa16.01■□□□□ 0.15
CCDC90B-205ENST00000525916 OPTNQ96CV9 577 aa16.01■□□□□ 0.15
CCDC90B-205ENST00000525916 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
CCDC90B-205ENST00000525916 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
CCDC90B-205ENST00000525916 APAF1O14727 1248 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 TAF5LO75529 589 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 MYCP01106 439 aaPredicted RBP16■□□□□ 0.15
CCDC90B-205ENST00000525916 CALD1Q05682 793 aaKnown RBP16■□□□□ 0.15
CCDC90B-205ENST00000525916 RASA3Q14644 834 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 SLC4A8Q2Y0W8 1093 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
CCDC90B-205ENST00000525916 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
CCDC90B-205ENST00000525916 RBM5P52756 815 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC90B-205ENST00000525916 CASP7P55210 303 aa15.99■□□□□ 0.15
CCDC90B-205ENST00000525916 TAF1CQ15572 869 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-205ENST00000525916 G2E3Q7L622 706 aa15.99■□□□□ 0.15
CCDC90B-205ENST00000525916 BRI3BPQ8WY22 251 aa15.99■□□□□ 0.15
CCDC90B-205ENST00000525916 H0YGN5 161 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 CSF1RP07333 972 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 IL1R1P14778 569 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 GCKRQ14397 625 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 C15orf52Q6ZUT6 534 aaKnown RBP15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 ZNF804AQ7Z570 1209 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 NBPF11Q86T75 865 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
CCDC90B-205ENST00000525916 CCL15-CCL14A0A0B4J2E2 113 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 FKBP1AP62942 108 aaKnown RBP15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 CCL15Q16663 113 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 OTUD5Q96G74 571 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 CHMP4AQ9BY43 222 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 MGAMO43451 1857 aa15.97■□□□□ 0.15
CCDC90B-205ENST00000525916 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 ARHGAP39Q9C0H5 1083 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 ZFYVE28Q9HCC9 887 aa15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 ZNF70Q9UC06 446 aaPredicted RBP15.96■□□□□ 0.15
CCDC90B-205ENST00000525916 AK9Q5TCS8 1911 aa15.96■□□□□ 0.14
CCDC90B-205ENST00000525916 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 VGLL4Q14135 290 aa15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 ARHGEF6Q15052 776 aa15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 TEPSINQ96N21 525 aa15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 TDRD3Q9H7E2 651 aaKnown RBP15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 MYH13Q9UKX3 1938 aa15.95■□□□□ 0.14
CCDC90B-205ENST00000525916 GTF2A2P52657 109 aa15.94■□□□□ 0.14
CCDC90B-205ENST00000525916 CHRDL2Q6WN34 429 aa15.94■□□□□ 0.14
CCDC90B-205ENST00000525916 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
CCDC90B-205ENST00000525916 TCP10L2B9ZVM9 353 aa15.93■□□□□ 0.14
CCDC90B-205ENST00000525916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.14
CCDC90B-205ENST00000525916 TMEM39BQ9GZU3 492 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms